| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1213 |
|---|
| Symbol | |
|---|
| ID | 4116275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 1234416 |
|---|
| End bp | 1235771 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638036003 |
|---|
| Product | inositol-3-phosphate synthase |
|---|
| Protein accession | YP_643991 |
|---|
| Protein GI | 108804054 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1260] Myo-inositol-1-phosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0342906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAGGA ATGAGGAGGC GAGGAAGGAG GGGGGCGAGA AGCTTGGGGT TCTGCTCGTT
GGGGTGGGAG GGGCGGTTGC CACCACCTTC ATGGCGGGCG TCGAGCTCAT AAGGCGGGGC
TTTGGGCGGC CTGTTGGGTC CCTGAGCCAG CTTGGCAGGC TTGCGCTCTC CCCGGACGGG
GAGGATCGGA GGAGCATAAA GGAGCTCTTG CCGCTTGCCT CGATGGAAGA GCTTGTGTTT
GGGGGCTGGG ACATCTTTGG GGAGGACTGC TACGAGGCTG CGGTGGGGGC TGGGGTTTTG
AGCAAGGAGC ATTTGGGGCT TGTGAGGGAC GCCCTCAGGG AGGTTGAGAT CTTCGAGGGG
GTCTTCGAGC GGCGCTTTGT GAGCTCTCTT GAGGGGGATC ACACCAAGGA GGGGCAGTAC
GAGAGCCTCT TTGAGGCGGC CTCGCTTGTG CGGGAGGAGA TCCGCGCTTT CAAGAGAAAG
AGCGGGGCGG GGAGGGCTGT GATGATCAAC TGCGCCTCGA CGGAGGCCCA CATCGAGCTC
GAGGAGGAGC GGTGGGGCAG GGTTCACAGA AGCGTTGAGG ACTTTGAGCG GGCGCTGAAA
GAGAACAAGA GCCACCCGGC CATCCCCCCC TCTGCGCTCT ACGCCTACGC GGCCATAGAA
GAGGGGGTGC CCTACGCCAA CGGCACGCCC TCCCTTGGGG CGCACAGTGC GGCCTTGAAA
GAGCTTGCCG AGCACAGGGG CGTTGCCATA AGCGGCAAGG ACTTCAAGAG CGGCCAGACC
TTCATAAAAA GCGCCCTTGC CCCGGCCATA AAGGCCAGGA TGCTTGGGAT GGAGGGGTGG
TTTTCGACCA ACATCCTGGG CAACCGGGAC GGGCTGGTTC TGGAGGCTCC GCAGAACTTC
AAGAGCAAGG AGCTCACAAA GCGCTCGGTG CTCGATGCCA TTCTGGAGCC CGAGCTCTAC
CCCGAGCTCT ATGGGGAGCT CTACCACAGG GTGGAGATAA ACTACTACCC GCCGCGGGGG
GACGCCAAGG AGGGCTGGGA CAACATAGAC ATCTTTGGCT GGCTTGGCTA CCCGATGCAG
ATAAAGCTCA ACTTTCTGTG CCGCGACTCC ATACTGGCTG CGCCCATAGT GCTTGACCTG
GCGCTCTTCA TGGACCTTGC CCAGAGGCTC TCCTATGGGG GCGGGGGGGT TCAGCGGTGG
CTCTCGTTCT ACTACAAGAG CCCCATGGTT GGGGAGGAGG CCAGAGAGAG GCCGGAGCAC
GACCTCTTTG CGCAGCTGCT CATGCTGAGG GGTGCGCTCA GGGAGATGGC CGGCCTCTCC
TCCGCTTCTC CCTGCGATCC CTCCTCCCTC AAGTGA
|
|---|
| Protein sequence | MRRNEEARKE GGEKLGVLLV GVGGAVATTF MAGVELIRRG FGRPVGSLSQ LGRLALSPDG
EDRRSIKELL PLASMEELVF GGWDIFGEDC YEAAVGAGVL SKEHLGLVRD ALREVEIFEG
VFERRFVSSL EGDHTKEGQY ESLFEAASLV REEIRAFKRK SGAGRAVMIN CASTEAHIEL
EEERWGRVHR SVEDFERALK ENKSHPAIPP SALYAYAAIE EGVPYANGTP SLGAHSAALK
ELAEHRGVAI SGKDFKSGQT FIKSALAPAI KARMLGMEGW FSTNILGNRD GLVLEAPQNF
KSKELTKRSV LDAILEPELY PELYGELYHR VEINYYPPRG DAKEGWDNID IFGWLGYPMQ
IKLNFLCRDS ILAAPIVLDL ALFMDLAQRL SYGGGGVQRW LSFYYKSPMV GEEARERPEH
DLFAQLLMLR GALREMAGLS SASPCDPSSL K
|
|---|
| |