| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1183 |
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| Symbol | |
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| ID | 4116828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1210014 |
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| End bp | 1211063 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638035973 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_643961 |
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| Protein GI | 108804024 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.272593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCAGGA TAGCGGTAAT CGGGGGGGAC GGCATAGGCC CCGAGGTGGT CGGGGCCGGC
GTCCGGGTAC TCGAGGCCGC AGCCCGCGCC GACTCCTCGC TGGAGCTGGA GTTCGAGCGG
TTCCCGTGGG GCTGCGAGCA CTACCTGAAG CACGGGCGGA TGATGCCCGA AGACGCCCTG
GAGACCCTCT CCTCCTTCGA CGCCATCTAC CTGGGGGCGG TGGGCTGGCC CTCGGTGCCA
GACCACGTCT CGCTGTGGGG CCTCCTGCTG CCCATCCGGC GCGGCTTCGA CCAGTACGTG
AACCTGCGGC CGGTGCGGCT GCTGCGCGGG GTCGGCAGCC CGCTGGCGGG GCGCGCACAG
CCGGACCTTC TCGTCGTGCG GGAGAACACC GAGGGCGAGT ACTCCGACGC CGGGGGCAGG
CTCCACCGGG GGACGCCGCA CGAGATCGCG GTGCAGGAGT CCGTCTTCAC CCGGCGCGGC
GTCGAGCGGA TCGTGCGCTA CGCCTACGAG CGGGCCCGCG AGCGGCGGGG CCTGCTCACC
GGGGCCACGA AGTCCAACGG GATCAGCGTG ACCATGCCGT TCTTCGACGA GATCTTCCGG
GAGGTGGGCG AGGAGTTCCC GGAGGTGGAG GCGAGCCTAA TGCACGCCGA CGCGCTGGCG
GCCCGGCTCG TGCTCGACCC CGCGGCCTTC GACGTGATCG TGGGCTCCAA CCTGCTCGGG
GACATCCTCT CGGAGATAAC CGCCGCCGTG TGCGGGGCCA TCGGGATAGC CCCCTCGGCC
AATTTGGACC CCACCGGCGA GCACCCCTCG CTCTTCGAGC CGATCCACGG CAGCGCCCCG
GACATCGCCG GCAGGGGGGT GGCCAACCCG GCGGGCGCGA TCTGGGCTGC CTCCCTCATG
CTGGATCACC TCGGCCACGG CGAGGCGGCC TCCCGGGTGC TCGGCGCGCT GGAGGAGACC
CTCGCCGGGG GCGTGAGGAC CCCGGACCTC GGGGGCGACG CGGGGACGGA GGAGGTCACC
CGCGCCGTCG TGCGGCGGCT GCTCTTCTAG
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| Protein sequence | MARIAVIGGD GIGPEVVGAG VRVLEAAARA DSSLELEFER FPWGCEHYLK HGRMMPEDAL
ETLSSFDAIY LGAVGWPSVP DHVSLWGLLL PIRRGFDQYV NLRPVRLLRG VGSPLAGRAQ
PDLLVVRENT EGEYSDAGGR LHRGTPHEIA VQESVFTRRG VERIVRYAYE RARERRGLLT
GATKSNGISV TMPFFDEIFR EVGEEFPEVE ASLMHADALA ARLVLDPAAF DVIVGSNLLG
DILSEITAAV CGAIGIAPSA NLDPTGEHPS LFEPIHGSAP DIAGRGVANP AGAIWAASLM
LDHLGHGEAA SRVLGALEET LAGGVRTPDL GGDAGTEEVT RAVVRRLLF
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