Gene Rxyl_1179 details

Gene Information

• Locus tag: Rxyl_1179
• ID: 4116824
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: +
• Start bp: 1204960
• End bp: 1206987
• Gene Length: 2028 bp
• Protein Length: 675 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 638035969
• Product: hypothetical protein
• Protein accession: YP_643957
• Protein GI: 108804020
• COG category: [R] General function prediction only
• COG ID: [COG1287] Uncharacterized membrane protein, required for N-linked glycosylation

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00516049
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGCAGG CGCTGCTACT GCTGGCGCTC CTCTCCCTCC CCGGCTGGCT CCTCGGGGGG 
CGCCTGGGGC GCAAGGGCGA CGGGCTCGCG GAGGCCCTCC TGCTGCGGGC CTGCGCCGCC 
CTCGCCGTGG GGCTCCCGGT ACTCGTGCTG CTCGCGCTGG CGGGGCGCTT CTCCCCGGCG 
TTCGTCGGCG GGGCGCTCGG GGCCTGCGCT CTCCTCGCGC TCCCCCTCGC GCGGCGGGTT 
GCGCTCCCGC GGCCGGGGCG GCGGGACCTG GCGGCGCTCG CGCTCGTGGC GGGGGCCTTC 
CTGCTGTACG CGCTGCCGGC CGAGTACGTC ATCAACAGCC GCGACCCCGG GGTGTACACC 
CTCTTCGCGG CCCGGCTGGC CCGGACCGGG GAGCTGCTGC ACCACGACCC GCTCGTGGGG 
GCGGTCTCGG GCTTCCACGA GTTCCTGGAG GGCAGGAAGT ACCCGGGGTT CTTCATCCTC 
GGGGAGGAAC TCATCGCGCC CCAGTTCTTC CCCGGCCCCT TCGCCCTGCT GGGGTTCGGG 
GCGCTGCTGG GCGGGGTGTG GGGGGCTCTT TACGTGGTGC CCGTGCTGGG GGCGCTCTCC 
GTGGGGGCGG CCTACGCGCT GGGGCGACAG CTCTTCGGGG GCTTGGCCGG GCTTTTGGGG 
GCGGCCCTGC TCGCGGCGAG CTACCCGCAG GTCTGGTGGT CCCGCCACCC CTCCAGCGAG 
GTGATGTCCC AGCTCTTCGT GCTCGGCGGG CTGTGGCTCG CGGTCAGGTT CGTCCGCAGG 
CCCGAGCCGC TCGCCGGGCT CCTGGCGGGG CTGTTGCTGG GGGGGGCTAT GCTGGTGCGG 
GTGGACGGCT TTCTCGCCGC GGCGGCCCTG CCGGCGCTCT TCGCCTGGGA TGCGGCGGCC 
CGCAGGCCCC TGCGGGCTTG GGCCTACCCC GCGGTGCCGC TCGCCCTGTG CGGGGCGGCG 
GCGCTGCTCT ACCTCAACAC CGCGGGGGCG CGCTACCTGT ACATCCTCTA CGCCGAGCAC 
GGGCTGCGGG AGGCGCTGCG TGCCTGGCCC CTCGCCCTCG CCGGGGCGGG GCTCCTGGCC 
GGGGGGCTCC TGTGGGTGCG GCGCCGGTGG GGGAGGGGGA TCGAGGCCTG GGGGGCCGCG 
CGCGGCGGGC GGGTGGCGGT GGGGCTCGCG CTCTCGGTCG TCGCCGCCTC GCTTTGGGCG 
TACTTCGTCA TGCCCGAGCC CTGGGAGAGC CTGCCCGAGA ACCTGCGCGG CTTCGACGCC 
TACCGGACCC AGGTGGCGGT CCGCATGGTC TGGTTTACCA CCCCGGCGGT GGCCGCGCTC 
GCGCTCGCCG GGCTGCTGCT CGCGGCGCGC CGGCCGGAGC GGGGGCTCGC GGTCTTCGCC 
GGGGCGTTGC TGGCCTTCGG CGTTCTGTAC GTCGCCTCGC CCAACGTGGC CCCCGACCTG 
CCGTGGGCCA CCCGCCGCTT CGTCCCGGCG GTGTTCCCCG GCCTCTGCCT GCTCGCCGGG 
TACGCCGCGG TGGAGGCGGG CAGGCTCGCG GCGCGGCGCG CGGGGAGGAG GGCCGGCGCC 
GCCGCGGGGG GGCTTCTCGC CGCGCTCGCG CTGGGGTGGA CCGCGCACGC CACCGCCCCC 
ATCCTGACCT TCCAGGAGCT CGACGGCGCG GTGGGCGCCC TGGCGCGGGT GGAGCGCGAG 
ATCCCGCGCT CCCGCGTGGT GTACATGGAG ATGCCCCCCG GGCACGACTG GACCGCCTCC 
ACCTTCGAGT ACCTCTACGG GCGCCCGGTG TTGCCCTACG ACCGGGTCCG GTTCATCCTG 
GAGAGCGACG AGCTGGAGGA GGCCGGGCTG CTGCGCGGCG CGGTCTACGT CACCACCGAC 
GGCGGGCCGG CGCCGCTGGT CTCCGGGCTG CGCTTCAGGG AGGTGGGCCG GGAGAGGGTG 
TCGCTGCCCC GGCTCGCTCC CGTGGAGGGG CACGAGAGCC GGATGCGCAA CCGGGTGGAG 
TTCCTGCGGA AGGACTACAG GATCTTCCGG ATAGAGGGGG AGCGGTGA 

 

Protein sequence

MLQALLLLAL LSLPGWLLGG RLGRKGDGLA EALLLRACAA LAVGLPVLVL LALAGRFSPA 
FVGGALGACA LLALPLARRV ALPRPGRRDL AALALVAGAF LLYALPAEYV INSRDPGVYT 
LFAARLARTG ELLHHDPLVG AVSGFHEFLE GRKYPGFFIL GEELIAPQFF PGPFALLGFG 
ALLGGVWGAL YVVPVLGALS VGAAYALGRQ LFGGLAGLLG AALLAASYPQ VWWSRHPSSE 
VMSQLFVLGG LWLAVRFVRR PEPLAGLLAG LLLGGAMLVR VDGFLAAAAL PALFAWDAAA 
RRPLRAWAYP AVPLALCGAA ALLYLNTAGA RYLYILYAEH GLREALRAWP LALAGAGLLA 
GGLLWVRRRW GRGIEAWGAA RGGRVAVGLA LSVVAASLWA YFVMPEPWES LPENLRGFDA 
YRTQVAVRMV WFTTPAVAAL ALAGLLLAAR RPERGLAVFA GALLAFGVLY VASPNVAPDL 
PWATRRFVPA VFPGLCLLAG YAAVEAGRLA ARRAGRRAGA AAGGLLAALA LGWTAHATAP 
ILTFQELDGA VGALARVERE IPRSRVVYME MPPGHDWTAS TFEYLYGRPV LPYDRVRFIL 
ESDELEEAGL LRGAVYVTTD GGPAPLVSGL RFREVGRERV SLPRLAPVEG HESRMRNRVE 
FLRKDYRIFR IEGER