Gene Rxyl_1171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1171 
Symbol 
ID4116816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp1197265 
End bp1197861 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content71% 
IMG OID638035961 
ProductGTP cyclohydrolase 
Protein accessionYP_643949 
Protein GI108804012 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.121032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCGAGG CCTATCCCCC GCGGGGCCGG GTCGACCGGG AGAGGATCCA GCGCGCGGTG 
CGCGAGATAC TGGTGGCCGT CGGCGAGGAT CCGGAGCGGG AGGGGCTCCT GGGGACCCCG 
CGGAGGGTCG CCGAGGCCTA CGAGTACCTC TTCTCCGGGC TCAGGGAGGA CCCGCTGCGC 
CACCTTCAGG TCGGCTTCAT GGAGGACTAC CGGGACCTCA TCATCGTCCG GGACATCTAC 
CTCGCCTCGC TCTGCGAGCA CCACCTGCTG CCGTTTATCG GGAGGGCGCA CGTGGCCTAC 
GCCCCGCGGG GCAAGGTGGT GGGGATCTCC AAGCTCGCCC GGCTGGTGGA GGGCTACGCC 
CGCCGGCCCC AGCTGCAGGA GCGGCTCACC TCCCAGATCG CCGACGCCCT CTACGAGGGG 
CTCGGCTCGC GGGGGTCGCT GGTCATCGTC GAGGCGGACC ACTCGTGCAT GACGATGCGG 
GGGGTGCAGA AGCCCGGGAG CGTCACCGTG ACCTCGGCCT CCCGGGGCAT CTACCGGGAG 
GACGGGGCGC TGCGCTCCGA GCTCACGGAC CTCATCCTGC GCGGGCGGGA GATCTGA
 
Protein sequence
MTEAYPPRGR VDRERIQRAV REILVAVGED PEREGLLGTP RRVAEAYEYL FSGLREDPLR 
HLQVGFMEDY RDLIIVRDIY LASLCEHHLL PFIGRAHVAY APRGKVVGIS KLARLVEGYA 
RRPQLQERLT SQIADALYEG LGSRGSLVIV EADHSCMTMR GVQKPGSVTV TSASRGIYRE 
DGALRSELTD LILRGREI