| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1170 |
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| Symbol | |
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| ID | 4116815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1196552 |
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| End bp | 1197268 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 638035960 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_643948 |
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| Protein GI | 108804011 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.382676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGAACT CGTCCTCCGC GAACGGGCTG CGCTACGACA CGGTGTTTCT GGACGTGGAC
GGCACGCTGC TTTGGGTGGA CCTGGACATC GAGGGGTACG TGAGGGACCT CGCGCCCTAC
GCCCCCGACG GCGGGCTCAC CGTCGAGCGG GCGGCCGGTC CGCTGCGCGA GAGCGTGAGG
ACCCACATCG CCGAGAACAT CAAGTACCGG ACGGCCGGGG CGCTGAACGA GTTCAGGCGG
CGCAACGCGC TCGCCACCGC CCGCAGGCTC GGCGTGGAGG CCCCGCCGGA GGTGATCACG
GGGGCCGCGG AGCGCAGGAT CTCCTTCCGG CCCTACCCGG AGTCCGAGGA GGTGCTGCGG
GAGCTCCGGG GGCTGGGGGC CCGGCTGTAC GTCGTCTCCA ACTGGGACGT GCTGCTGGAG
GAGGTGCTGC GGGATCTGGG GTGGCGGGGG TACTTCCAGG GGGTGGTGGC CTCCGCCGCC
GTCGGCCGCG AGAAGCCCGA CCCGGGCATC TTCGAGGAGG CGCTGCGGCG CAGCGGGGCG
TCCCGGGGGC GCACCGTGCA CGTGGGGAAC GACCCCGTCG CGGACGTCGA GGGGGCGCGC
GCCGCCGGGA TAGACGCCGT GCTGGTGGAC CGGCGGGGGG GAGGGGGGCA TCCGGAGGCC
GCCTTCGTCG TCTCCGACCT CCGGGAGGTG CCGGGGATAG TGCGGGGCGA GAGTTGA
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| Protein sequence | MTNSSSANGL RYDTVFLDVD GTLLWVDLDI EGYVRDLAPY APDGGLTVER AAGPLRESVR
THIAENIKYR TAGALNEFRR RNALATARRL GVEAPPEVIT GAAERRISFR PYPESEEVLR
ELRGLGARLY VVSNWDVLLE EVLRDLGWRG YFQGVVASAA VGREKPDPGI FEEALRRSGA
SRGRTVHVGN DPVADVEGAR AAGIDAVLVD RRGGGGHPEA AFVVSDLREV PGIVRGES
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