| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1167 |
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| Symbol | |
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| ID | 4116851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1193937 |
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| End bp | 1195064 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638035957 |
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| Product | twitching motility protein |
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| Protein accession | YP_643945 |
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| Protein GI | 108804008 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.69165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGGAGGA AGATGGAGTC GAGCGGAGGC GGGCCCGGGA ACCGGCGGGA TCTATCGAGG
ATCGAGGGGC TCCTGGAGGA GATGGTTGCG ATGGGGGGCA GCGACCTGCA CCTGAAGGTG
GGCAGCCCGC CGGTGGTGCG CGTTGACGGG CTCTTGCGGC GGCTGGAGGG CTTCGCGGAC
CTCGAGCCCG CGCACACGGT GGAGGCCCTC TCCCAGATAC TCCCCGCCGC GCTCGCCCGG
GACTTCGAGG TGGAGGGGGA GGCGGACTTC TCCTACTCGG TCGAGGGGCT CGGGCGCTTC
CGGGTGAACG CCTTCCGCCA GCGCGGCTCG GTTTCGCTGG CGATGCGCTT CGTGCCGTTC
GAGGTGCCGC GCTTTGAGGA GCTGGGGCTG CCCGAGGCGG TGGGGCGCCT GGCGAGGGAG
GAGCGGGGCA TCGTGCTGGT CACCGGCACC ACTGGCAGCG GCAAGTCCAC CACGCTCGCC
GCCATGATCG ACCTCATAAA CCGCTCGGAG GCCCGGCACA TCGTGACCGT GGAGGACCCC
ATAGAGTTTC TGCACCGGGA CCGCAGGAGC ATCATCAACC AGCGGGAGGT GGGGATGGAC
ACCGCCTCCT TCTCGCGGGC GCTGCGGCGG GTGCTGCGGC AGGACCCCGA CGTGATCCTG
ATCGGGGAGA TCCGGGACGC CGAGACCGCC CAGATAGCCC TCTCCGCCGC CGAGACCGGC
CACCTGGTGC TCTCCACCCT GCACACGGTG GACGCCACCG AGACGGTGAA CCGGCTCATA
GACCTCTTCC CCCCGCACGA GCGGGTGCAG GTGCGCTCGA TGCTGGCGGG CACCCTGCGC
GGGATCGTCG GCCAGCGGCT GCTGCGGGCC AGGGACGGTG GCCGGGTGGT GGCCTGCGAG
GTGCTGGTGG CCACCGGGAG GATCCGGGAG TTCATCCTGG ATGCGTCGAA GACCGCCCAG
ATACAGGAGG CGATCGCCGA GGGCGGCTAC TACGGGATGC AGACCTACGA CCAGGCGCTC
CTGGAGCTGG TGCGCGAGGG CCGGGTGGGC TACGAGGAGG CGGTGCGGGC CTCCAGCCAG
CCGCAGAACT TCCGCCTGAT GGTGCGCTCT CTGGGGATCG GGGGCTAG
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| Protein sequence | MRRKMESSGG GPGNRRDLSR IEGLLEEMVA MGGSDLHLKV GSPPVVRVDG LLRRLEGFAD
LEPAHTVEAL SQILPAALAR DFEVEGEADF SYSVEGLGRF RVNAFRQRGS VSLAMRFVPF
EVPRFEELGL PEAVGRLARE ERGIVLVTGT TGSGKSTTLA AMIDLINRSE ARHIVTVEDP
IEFLHRDRRS IINQREVGMD TASFSRALRR VLRQDPDVIL IGEIRDAETA QIALSAAETG
HLVLSTLHTV DATETVNRLI DLFPPHERVQ VRSMLAGTLR GIVGQRLLRA RDGGRVVACE
VLVATGRIRE FILDASKTAQ IQEAIAEGGY YGMQTYDQAL LELVREGRVG YEEAVRASSQ
PQNFRLMVRS LGIGG
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