| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1166 |
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| Symbol | |
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| ID | 4116850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1191965 |
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| End bp | 1193683 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638035956 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_643944 |
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| Protein GI | 108804007 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCAG GATCCGGGAC AACGGGAGGC AGGGAGAGAA ACCGCAGCGT CTGGAGCCTC
CTGCTCTCGG AGGGGAGCCT CACCGAGGAG CAGCTGCACC GCGCCGTGGA GGCCCAGAAG
CACGACCCCC GGGATCTCGG CCAGATCCTC GTCTCCCTGG GGTACGTCTC GGCCGAGGAG
CTGGCGCGGG CCCGGGCGCG GCGGCTCGGG CTCGGCTACC TCGAGCCCTC CGAGCGGGAC
GTGGACCCGG CCGCGCTCGG CCTCGTCCCG GAGAGGGTGC TGCGCCGCCA CAGGGCGCTC
CCCCTGCGGC TGGAGGAGGG GAGGCTCGTG GCCGCCCTCG CGGACCCCAC CGACCTGCAG
GCGCTCGACG ACCTGCGGAT GCTCTCCGGC TACCCCGTCA CCCCGGTGGT GGCCACCGAG
GAGGCCATCC GCAGGCTGCA GATAAAGCTC TTCGCCGTGG ACGAGCGGGT GACCGGCATC
CTGCGGGAGG CGGAGCTTCG TGAGGCGCGG GAAGAGGACG ACGACCTCGA CCTCGGGGCC
GGGGCAGGGG CCGAGGAGCG GCCCGTCATA CGGCTGGTGA GCTCCATCCT GCAGCAGGCC
ATCTCCGACG GGGCCTCGGA CATCCACCTC GAGCCGCGCC CCGGCAGGCT CGCCGTGAGG
GTCCGGGTGG ACGGACTGCT CCGGGAGGTC ATGTCCATCC CCCACAGGCT GCAGAGCGGG
GTGATCTCCC GGCTCAAGCT CGTCTCCGGG CTGGACATCG CCGAGCGGCG GCTGCCGCAG
GACGGGCGGT TCTCGGTGAG GATCGGGCAG CAGAAGGTGG ACTTCCGGGT GGCCTCGCTG
CCCACCGTGC ACGGGGAGAA GGTCGTGCTG CGGCTGCTGG ACAACTCGCA CGCCGCGGCC
CGGCTGCCGG AGCTCGGGCT CTCCCCGGAG CTCCACCGCC GCTACGAGAG CGTCTTCCGC
AGGCCCTACG GGGCGATCCT CGTCACCGGG CCCACCGGCA GCGGCAAGTC CACCACCCTG
TACGCCACGC TCGCCGAGCT CAACGACCCC CGGAAGAACA TCATCACCGT GGAGGACCCG
GTGGAGTACA GGATCGAGGG GATAAACCAG ATCCAGGTCA ACCCCCGCAT CGGCCTGAGC
TTCGCCTCCG CGCTCAGGAG CATCCTGCGC AGCGACCCGG ACGTCGTGAT GATCGGGGAG
ATAAGAGACC ACGAGACCGC CAAGATCGCG GTGGAGTCCG CCCTCACCGG GCATCTGGTC
CTGGCCACGC TCCACACCAG CGACGCCCCC GGGGCGCTCA CCCGCCTCAC CGACATGGGC
GTGGAGCCCT TCCTGACCGC CTCGGCGGTG GACTGCGTGG TCGCCCAGCG GCTCGCCCGC
CGGCTGTGCG AGCGGTGCCG GAGGCCGGCG GAGGTGGAGA GGGGCCTGCT CGAGGGCATC
GGCTTCCCCT TCCAGCTGAT CTCCGAGGAG GAGGCGAGCT TTCACCGGGC GGTGGGCTGC
GAGTGGTGCG GCGGGACCGG CTACCGGGGC AGGATCGGGG TCTACGAGCT GATGATGGTG
GACGAGGCGG TGGGGGAGCT CGTCCTGCGG CGCGCCTCCA CCGCGGAGAT CGCCCGGGCG
GCCGAGGCGG GCGGGATGGT GCGGCTGCGG GAGGACGCGC TCCTGAAGGC GGCCCGCGGC
ACGACGACGA TCGAGGAAGC GTTGAGGACG GTGGTATGA
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| Protein sequence | MAAGSGTTGG RERNRSVWSL LLSEGSLTEE QLHRAVEAQK HDPRDLGQIL VSLGYVSAEE
LARARARRLG LGYLEPSERD VDPAALGLVP ERVLRRHRAL PLRLEEGRLV AALADPTDLQ
ALDDLRMLSG YPVTPVVATE EAIRRLQIKL FAVDERVTGI LREAELREAR EEDDDLDLGA
GAGAEERPVI RLVSSILQQA ISDGASDIHL EPRPGRLAVR VRVDGLLREV MSIPHRLQSG
VISRLKLVSG LDIAERRLPQ DGRFSVRIGQ QKVDFRVASL PTVHGEKVVL RLLDNSHAAA
RLPELGLSPE LHRRYESVFR RPYGAILVTG PTGSGKSTTL YATLAELNDP RKNIITVEDP
VEYRIEGINQ IQVNPRIGLS FASALRSILR SDPDVVMIGE IRDHETAKIA VESALTGHLV
LATLHTSDAP GALTRLTDMG VEPFLTASAV DCVVAQRLAR RLCERCRRPA EVERGLLEGI
GFPFQLISEE EASFHRAVGC EWCGGTGYRG RIGVYELMMV DEAVGELVLR RASTAEIARA
AEAGGMVRLR EDALLKAARG TTTIEEALRT VV
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