| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1164 |
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| Symbol | |
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| ID | 4116848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1189653 |
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| End bp | 1190864 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638035954 |
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| Product | type II secretion system protein |
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| Protein accession | YP_643942 |
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| Protein GI | 108804005 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.754392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCGTCT TCGCCTACAA GGCCCGCGAC CGGCAGGGGC AGGTGGTGCG GGACACCGTG
GAGGGCCCGG ACCCGATGTC CGTCGCCGCG GCGCTGCGCA GCCAGGGGCT TTTGGTCATC
GAGGTCAAGG AGCAGGGCGT CGGGCAGAGG GACATCCTGG AGCCCTTCAA GCGGGTGCGG
CTCGGGGATC TCGTGGTGTT CACCCGGCAG CTCTCCACCA TGATCAACGC CGGTCTGCCC
ATCGTGCGGG CGCTCCACAT CCTCGAGGAG CAGACCGCCA ACAAGAAGCT GCGCGACGTC
ATCGTGAAGG TCCGCTCCGA CGTGGAGGCC GGGATGGCGC TCTCGGAGGC GCTGGAGCGG
CACCCCGAGG TCTTCGGGCG GCTGTACGTG GAGATGGTGC GGGCCGGGGA GGTCGGCGGG
GTGCTGGACC GGGTGCTCCT GCGTGTCGCC TCCCAGCTGG AGAAGGACCA GGAGCTGCGG
CGCAAGATAA AGAGCGCCCT CGCCTACCCG GCCGTGGTGC TGGTGGCGGC GGTGCTCGCC
GCGGCGTTCA TGCTCATCTT CATCGTCCCC ATCTTCGCCC GCATGTTCGA GGATCTGGGC
GGGACGCTCC CGCTGCCGAC CCGGATCGCG ATGGGGATCT CCGACCTGCT CACCGGGCCC
TGGGGGCTCG CCCTGGCGGC GGCGCTCGCG GGCGGGGGCC TCCTGTTCGC GCGCTGGCTC
CGGACCGAGG AGGGCCGGAG GTTCTGGGGC AGGACGGTGC TCCGGATACC CCTCAGGATC
GGGGAGACCG TCAGAAAGGC CGTGCTCGCC CGCTTCGCCC GCACGCTCGG CTCGCTCGTC
GCCGCCGGCG TGCCCATCCT GCAGGCCATA GAGATCACCG CCGCCTCCTC CGGCAACTGG
GTGGTGGAGA ACGCCCTCAT GAAGAGCCGG GACGCCATCC GGGAGGGCCA CCCGCTCCAC
CGGCCCCTGG AGGGCGAGGC CGTCTTCCCG CCCATGGTCA CCCGCATGAT CGCCGTCGGC
GAGGAGACCG GCGATCTGGA GGGGATGCTC GGCAAGATAG CGGACTTCTA CGAGTCCGAG
GTGGAGGCGG CGGTGAAGGC CCTCACCTCC ATCATAGAGC CCGTCATGAT CGTGATCGTC
GGGGGGATCG TGGGCGGGAT CATCATCTCC ATGTACCTCC CGATGTTCCG GATCTTCGAG
CTTATCGAGT AG
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| Protein sequence | MGVFAYKARD RQGQVVRDTV EGPDPMSVAA ALRSQGLLVI EVKEQGVGQR DILEPFKRVR
LGDLVVFTRQ LSTMINAGLP IVRALHILEE QTANKKLRDV IVKVRSDVEA GMALSEALER
HPEVFGRLYV EMVRAGEVGG VLDRVLLRVA SQLEKDQELR RKIKSALAYP AVVLVAAVLA
AAFMLIFIVP IFARMFEDLG GTLPLPTRIA MGISDLLTGP WGLALAAALA GGGLLFARWL
RTEEGRRFWG RTVLRIPLRI GETVRKAVLA RFARTLGSLV AAGVPILQAI EITAASSGNW
VVENALMKSR DAIREGHPLH RPLEGEAVFP PMVTRMIAVG EETGDLEGML GKIADFYESE
VEAAVKALTS IIEPVMIVIV GGIVGGIIIS MYLPMFRIFE LIE
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