| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1161 |
|---|
| Symbol | |
|---|
| ID | 4116845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1187863 |
|---|
| End bp | 1188288 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638035951 |
|---|
| Product | prepilin-type cleavage/methylation-like protein |
|---|
| Protein accession | YP_643939 |
|---|
| Protein GI | 108804002 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTAAGC ACCTCGGAGA CGAGTCCGGC TACTCGCTGG TGGAGGTGCT GGTCTCCATC
ATGATCCTCA CCATGGCCAT CGTCCCGATG GTCGCGATGT TCGACGTGGG GCTCGAGAGC
GCCACCCTCG GCGGCAACTA CGACAGGGCA CGGGCCTTCG CCTCCGGCAA GCTGGAGGAG
GCCAAGAGCC TCCCCTACGA GCAGCTCAAG GCCAGATATC CCGTGTCCGC GTCCCCTTCA
TCGCTCCTCG CCGCCGGCTC GGAGCTGCCT GCGGGCTCCA CCTACACCGT GGACACCGAC
TACCTCCGGG TATCCGGCGA GGAGTTCGTC GCGGACAACT CGCGGGACAG GGGTCTGATC
CGGGTTACCG TAACCGTAAG GTGGCCGCAG GGAAGCTACA CGACCATGGG GCTCAAGGCC
CGGTGA
|
|---|
| Protein sequence | MSKHLGDESG YSLVEVLVSI MILTMAIVPM VAMFDVGLES ATLGGNYDRA RAFASGKLEE
AKSLPYEQLK ARYPVSASPS SLLAAGSELP AGSTYTVDTD YLRVSGEEFV ADNSRDRGLI
RVTVTVRWPQ GSYTTMGLKA R
|
|---|
| |