| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1157 |
|---|
| Symbol | |
|---|
| ID | 4116841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1184636 |
|---|
| End bp | 1185163 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638035947 |
|---|
| Product | RDD domain-containing protein |
|---|
| Protein accession | YP_643935 |
|---|
| Protein GI | 108803998 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1714] Predicted membrane protein/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATCACGA CGCCCCTCCG AAAGCGGGGG GCGTCTGCCC TTACTACGAA AGGAGAAGCC
CGGCTCATGA GCCACCAGAC CTACGGGACG GGCCGCCCCG CGCAGGCGGG GGACGTGCAC
GTGACCGGCC GGAGGGTGCT CGCCACCATA GTGGACGGCA TCGTCTTCTT CCTGCTCTTC
CTGCCGCTCA ACCTGTTCAC GGCCCTCGCC GGGGCGGCGA GCGGGAGCGA GGAGGTGGCG
GCGGGGCTGT CGCTCGTCAC CTCCCTCATA ACCCTCGCGG TGGGCTTCGC CTACTACGTG
CTGACGGAGG GCTACTGGGG CCGGACGGTC GGCAAGGCAA TCTGCGGCAT AAGGGTGGTG
CGCGAGGACG GCGGCTCGCC GGGCTTCGGC CCCGCCGCCA TAAGGACAGT GCTGCGGCTG
GTCGACGGGC TCTTCGGCTA CCTGGTGGCC TTCGTGGTGG TGCTCGCCTC GCGCAGGCGC
AAGCGCCTGG GGGACATGGC GGCCTGCACC CTGGTCGTCC GGGGGTAG
|
|---|
| Protein sequence | MITTPLRKRG ASALTTKGEA RLMSHQTYGT GRPAQAGDVH VTGRRVLATI VDGIVFFLLF
LPLNLFTALA GAASGSEEVA AGLSLVTSLI TLAVGFAYYV LTEGYWGRTV GKAICGIRVV
REDGGSPGFG PAAIRTVLRL VDGLFGYLVA FVVVLASRRR KRLGDMAACT LVVRG
|
|---|
| |