Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1142 |
Symbol | |
ID | 4117374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 1172681 |
End bp | 1173463 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638035932 |
Product | ABC transporter related |
Protein accession | YP_643920 |
Protein GI | 108803983 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGAAGG CGATCGAGGT CCGGGATCTC ACCGTCGTCT ACGGCGGCCG GCCCGCCCTG GAGGGGGCGG AGCTGGAGCT CCCGCGGGGG GCGATGCTCG GGGTCGTGGG CCCCAACGGG GGCGGGAAGA GCACCCTGCT CAAGGCCGTG CTCGGGATAG CGCCGGTGGC GCGGGGGGAG GTGCGGGTGC TCGGCCGCAG GCTCGACCGG CGCTCGCGGC GGCTCGTCGG CTACGTCCCG CAGCGGGAGG ACGTGGACTG GGACTTTCCC GTCAGCGCCT TCGACGTGGT CATGATGGGG CGGGTGCCCT CCATGGGCCT GCTCCGCCGC CCCTCCGCGC GGGACAGGGA GCTGGTGTGG GGGGCGCTCG AGGCCGTCGG CATGGCCCCT CTCGCGCACA AGAGGATCGG GGAGTTCTCC GGGGGGCAGC AGCAGAGGAT CTTCCTCGCC CGGGCGCTAG CGCAGGAGGC CGAGGTGCTG CTGCTCGACG AGCCCGTCTC CGGGGTGGAC GCGCCGTCGC AGCACGAGAT CTTCGACCTG CTCCACGGCC TGCAGGGGCG GGGCAAGACC ATCGTGGTCA CCACCCACGA CCTCTCCTGC GTGGCCGAGC GCTTCGATTT GGCGCTGCTG CTCAACCGGC GGGTGGTGGC CTGCGGCCCG CCCTCGGAGG TCTTCGTCCC CGAGCTGCTC AACGAGACCT ACCAGAGCCA CCTCATGATC CTGCGGGTCG GGGACCGGAC CGTCGCCGTG GAGACCGAGC GGCCGGGAGG CGGCGGTGGG TGA
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Protein sequence | MQKAIEVRDL TVVYGGRPAL EGAELELPRG AMLGVVGPNG GGKSTLLKAV LGIAPVARGE VRVLGRRLDR RSRRLVGYVP QREDVDWDFP VSAFDVVMMG RVPSMGLLRR PSARDRELVW GALEAVGMAP LAHKRIGEFS GGQQQRIFLA RALAQEAEVL LLDEPVSGVD APSQHEIFDL LHGLQGRGKT IVVTTHDLSC VAERFDLALL LNRRVVACGP PSEVFVPELL NETYQSHLMI LRVGDRTVAV ETERPGGGGG
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