Gene Rxyl_1142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1142 
Symbol 
ID4117374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1172681 
End bp1173463 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content73% 
IMG OID638035932 
ProductABC transporter related 
Protein accessionYP_643920 
Protein GI108803983 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGAAGG CGATCGAGGT CCGGGATCTC ACCGTCGTCT ACGGCGGCCG GCCCGCCCTG 
GAGGGGGCGG AGCTGGAGCT CCCGCGGGGG GCGATGCTCG GGGTCGTGGG CCCCAACGGG
GGCGGGAAGA GCACCCTGCT CAAGGCCGTG CTCGGGATAG CGCCGGTGGC GCGGGGGGAG
GTGCGGGTGC TCGGCCGCAG GCTCGACCGG CGCTCGCGGC GGCTCGTCGG CTACGTCCCG
CAGCGGGAGG ACGTGGACTG GGACTTTCCC GTCAGCGCCT TCGACGTGGT CATGATGGGG
CGGGTGCCCT CCATGGGCCT GCTCCGCCGC CCCTCCGCGC GGGACAGGGA GCTGGTGTGG
GGGGCGCTCG AGGCCGTCGG CATGGCCCCT CTCGCGCACA AGAGGATCGG GGAGTTCTCC
GGGGGGCAGC AGCAGAGGAT CTTCCTCGCC CGGGCGCTAG CGCAGGAGGC CGAGGTGCTG
CTGCTCGACG AGCCCGTCTC CGGGGTGGAC GCGCCGTCGC AGCACGAGAT CTTCGACCTG
CTCCACGGCC TGCAGGGGCG GGGCAAGACC ATCGTGGTCA CCACCCACGA CCTCTCCTGC
GTGGCCGAGC GCTTCGATTT GGCGCTGCTG CTCAACCGGC GGGTGGTGGC CTGCGGCCCG
CCCTCGGAGG TCTTCGTCCC CGAGCTGCTC AACGAGACCT ACCAGAGCCA CCTCATGATC
CTGCGGGTCG GGGACCGGAC CGTCGCCGTG GAGACCGAGC GGCCGGGAGG CGGCGGTGGG
TGA
 
Protein sequence
MQKAIEVRDL TVVYGGRPAL EGAELELPRG AMLGVVGPNG GGKSTLLKAV LGIAPVARGE 
VRVLGRRLDR RSRRLVGYVP QREDVDWDFP VSAFDVVMMG RVPSMGLLRR PSARDRELVW
GALEAVGMAP LAHKRIGEFS GGQQQRIFLA RALAQEAEVL LLDEPVSGVD APSQHEIFDL
LHGLQGRGKT IVVTTHDLSC VAERFDLALL LNRRVVACGP PSEVFVPELL NETYQSHLMI
LRVGDRTVAV ETERPGGGGG