Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1141 |
Symbol | |
ID | 4117373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 1171749 |
End bp | 1172681 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 638035931 |
Product | periplasmic solute binding protein |
Protein accession | YP_643919 |
Protein GI | 108803982 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCTGA GGCGGGCGCT TCTCGCGCCG CTGCTCCTCC TCCTGCTCGC TGCGGGGTGC GCCGGTTCCT CCGGGGAGGG GGGCGGCGGG CGGCCGGAGG TCGCCGCCAC CACGCCGGTC ATAGGGGACC TCGTGCGGCA GGTCGCGGGG GGTCGGGCGG AGGTCTTCGT GCTCGTGCCC CCGGGCGCCG AGCCGCACAC CTTCCAGCCG GCGCCGCGCG ACGCGGCCCG CCTCTCCCGC GCCGAGGCGG TCTTCAAGAA CGGGCTCGGG CTCGACGACT GGGTGGACGA CCTGATCGAG AGCGCCGGCG GGGAGGGGCA GACCGTGGTC GAGCTCTCCC GCGGCCTCGA GCCCGTGGGC GCGGAGCACG GCCACCACGA CGAGGAGGAG CACGGCCACC ACGGCGGGCA CGCCCGGGGC AACCCGCACT TCTGGCTCGA CGTGCGCTAC GCGATGCGCT ACGTGGAGCG GATAAGGGAC GCGCTCATCC GGGTGGACCC CGGGGGGGAG GAGGTCTACC GGGAGAACGC GCGGCGTTAC CTGCGGGAGC TCGAGCGGCT CGACCGGTAC ATCCGGGAGC GGGCCGGCTC CATCCCCGAG GAGCGCCGCA AGCTGGTGAC CTTCCACGAC GCCTTCCCTT ACTTCGCCCG GGCCTACGGG TTCGAGGAGG TCGCGGTCGT CCTCCCAAAC CCCAACGCCG AGCCCGGGAG CCGGCAGGTG GCGCGGGTCG TGCGGGTCGT GCGGGAGGAG GGGGTGCCGG CCATCTTCAC CGAGCCGCAG TTCAACTTTC GGCTCGCGCG CACCGTGGCC GAGGAGGCCG GGGTGGAGGT CTACGAGATC TACTCGGACA CCCTCCCGGC CGGGGACGGG CCGCGCACCT ACGAGGCCAT GATGCGGGCC AACATCGACC GGATAGCGGA GGCGCTGGGG TAG
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Protein sequence | MPLRRALLAP LLLLLLAAGC AGSSGEGGGG RPEVAATTPV IGDLVRQVAG GRAEVFVLVP PGAEPHTFQP APRDAARLSR AEAVFKNGLG LDDWVDDLIE SAGGEGQTVV ELSRGLEPVG AEHGHHDEEE HGHHGGHARG NPHFWLDVRY AMRYVERIRD ALIRVDPGGE EVYRENARRY LRELERLDRY IRERAGSIPE ERRKLVTFHD AFPYFARAYG FEEVAVVLPN PNAEPGSRQV ARVVRVVREE GVPAIFTEPQ FNFRLARTVA EEAGVEVYEI YSDTLPAGDG PRTYEAMMRA NIDRIAEALG
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