Gene Rxyl_1137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1137 
Symbol 
ID4117369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp1167704 
End bp1168357 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content68% 
IMG OID638035927 
Productpeptidase C60, sortase A and B 
Protein accessionYP_643915 
Protein GI108803978 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3764] Sortase (surface protein transpeptidase) 
TIGRFAM ID[TIGR01076] LPXTG-site transpeptidase (sortase) family protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCCTGC GGATGGGTCG CCTGGCAAAC ATAGTGCTCA ACGTCATGAG CCTCGTCCTG 
GTGGTCGCCG GGCTGGCGCT CGTCTCGACC TTCTTCTTCG GCTCCCCGGT CCCCTCCCCG 
GTCACGGGCG GCCGGGCGGC CGACGCCCAG AACTTCGAGG TGCCTGTGCT GACCAAGAAC 
GCCGCGCCGG CCAGCGCCGA GCGGCAGCGG GAGCCCGAGG TCCGGGTCCC CGAGGACAGG 
ACCATCAGGA TCACCGTGCC CAAGATGGCC CGGGTGCGCG ACGCGGTCGT CCCCTACACC 
ACCGGCAACG ACGAGGAGGC CCTGAGGAAC CACGTGGGCA TCCACCTCAA GGGCACCGGC 
TTCCCCTGGG AGCCCGGCGC CAACGTGTAC ATCGCCGGCC ACCGGCTCGG CTACCCCAAC 
ACGCCGAGCT TCCTCGCCTT CTTCGACCTC AACAAGCTCA GGAAGGGCGA CGAGATCATC 
CTGACCGACT CTTTGGGCCG CAGGTACGTC TACCGGGTCT TCAGGGTCCT GGTCGTCGAC 
CCCACGGACA TCTACGTCAC CCGCCCGGTG GAGGGCAAGA GCGTGGTGAC CCTGCAGACC 
TGCACCCTGC CGGACTACTC GCAGCGGCTG ATCGTCCAGG CCGAGAAGGT ATAA
 
Protein sequence
MGLRMGRLAN IVLNVMSLVL VVAGLALVST FFFGSPVPSP VTGGRAADAQ NFEVPVLTKN 
AAPASAERQR EPEVRVPEDR TIRITVPKMA RVRDAVVPYT TGNDEEALRN HVGIHLKGTG 
FPWEPGANVY IAGHRLGYPN TPSFLAFFDL NKLRKGDEII LTDSLGRRYV YRVFRVLVVD 
PTDIYVTRPV EGKSVVTLQT CTLPDYSQRL IVQAEKV