| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1116 |
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| Symbol | |
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| ID | 4116859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1149174 |
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| End bp | 1149947 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638035906 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_643894 |
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| Protein GI | 108803957 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.517895 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGTAAGA TCTACCTTCC CTCGCCCCGC GGGGCGTTCC GGGTCTGGCA GCGCGACCTC
ACGGTGTTCC GGAAGTTCTG GAAGGCGGCG CTCATGCCGA ACTTCATCGA GCCGTTCTTC
TATCTGGCCG CGCTCGGGCT GGGGCTCGGG GCCTTTGTGC GGGACATCAA CGGCCAGGAC
TACATCCAGT ACATAGCGCC GGGGCTCCTC GCCAGCAACG CCATGTTCGC CGCCTCCTTC
GAGAGCACCT TCAACACCTT CGTGAAGCTG AAGTTCGACA AGGTCTACGA CGCGATAATA
GCCACCCCGG TCAACGCCGA GGACATCGTG GTCGGGGAGT ACCTGTGGGC CGGGACCCGC
GCGGCCCTCT ACGGGACGGC CTTCACGGCG GTCATCGCCG CGCTCGGGCT GGTGCACTCT
CCCTGGGCGC TGCTCCTCCC GCCTTTCCTG TTCCTGGTGG GGCTGATGTT CAGCGTGATG
GGGACCCTGT TCACCAGCCT CATAAAGAGC ATAGACTTCT ACGCCTACTA CTTCACGCTG
GCGGTCACCC CGATGTTCCT CTTCTCCGGG ATCTTCTTCC CCATCGAGGG CTTCCCCGCC
CCGGTGCCGC AGCTGGCGTG GATGACCCCG CTCTACCACG CGGTGAACGT CTGCCGCGAG
CTGGCGGGGG GCCCCTCGCC GGGGGTGCTG GTGGACGTGG CGTGGATAGC GGTCTTCACC
GGCGTCCTGT TCCTGATCCC GGTGCAGATA ATGCGCCGGC GGCTCATCAG CTAG
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| Protein sequence | MSKIYLPSPR GAFRVWQRDL TVFRKFWKAA LMPNFIEPFF YLAALGLGLG AFVRDINGQD
YIQYIAPGLL ASNAMFAASF ESTFNTFVKL KFDKVYDAII ATPVNAEDIV VGEYLWAGTR
AALYGTAFTA VIAALGLVHS PWALLLPPFL FLVGLMFSVM GTLFTSLIKS IDFYAYYFTL
AVTPMFLFSG IFFPIEGFPA PVPQLAWMTP LYHAVNVCRE LAGGPSPGVL VDVAWIAVFT
GVLFLIPVQI MRRRLIS
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