Gene Rxyl_1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1092 
Symbol 
ID4116113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp1124868 
End bp1125851 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content73% 
IMG OID638035882 
Productaspartate semialdehyde dehydrogenase 
Protein accessionYP_643870 
Protein GI108803933 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.948427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTGAGCT TGCAGACGAA GGACGGATAC AGCGTGGCCG TGGTCGGCGC CGGGCTCGTG 
GGGGAGCGGC TGGTCTCCGA GCTGCGGCGC CGGAGGTTCC CCCTGCGCGA GCTGCGGGTC 
CTGGCGCGCA GCTCGCGCAG GGCCATCCTG GACGGGGAGG AGTTCGAGAT CGGGGTGGCC 
GAGCCCGGGG CCTTCGAGGG GGTGGACTTC GCCTTCTTCG CCGGCACCGA GGGGGAGAAG 
GGCGCCGCGG TGCAGCTGGC CCGGGAGGCG ATAGACCGCG GCGCCACCGT GATAGACAAC 
GGCAGCGACT TCCGGCTGGA CCCCCGGGTG CCGCTGGTCG TCCCGGAGGT GAACGCCGGG 
GCCCTGGAGG GGCACGAGGG GCTCATCGCC AACCCCAACT GCTCCACCAT CCAGATGGTG 
GTGACGCTGG CCCCGCTCGC CCGCCGGTTC GGGCTCCGCA AGGTGGTCGT CTCCACCTAC 
CAGGCCGTCT CGGGCGCCGG CAGGGGCGGG GTGGAGGCCC TCCAGAGCGG CGCCGGCGAG 
GCCTTCCCCA AGCCCATCGC CGGGAACGCC ATCCCGCTCA TAGGCTCCGT GGGGGAGGAC 
GGGTACACGA GCGAGGAGCG CAAGATGCGC GAGGAGTCGC GCAAGATCCT CTCCCTGCCC 
GACCTCCCGG TCTACGCCAC CGCGGTGCGC ATCCCGGTGC ACACCGGGCA CTCGGAGAGC 
GTCTACGTGG AGCTGGAGAG GGAGGCGGAG CCCGGGGAGG TGCTCTCCGC CTTCGGGGAG 
GCCCCCGGCA TCTCCTTCTC CGGCGACCCG GACGACTTCC CCACCCCGCT CGAGGCCGCC 
GGGGAGCCGG GGACCTTCGT GGGCCGGGTG CGGGTCGAGG GGGACCGCGT GAGCTACTGG 
TGCGTGGCGG ACAACCTGCT GAAGGGGGCG GCCACCAACG CGGTGCAGAT CGCCGAGACG 
CTCGTCGGCG CGAGGGTCCG CTAG
 
Protein sequence
MVSLQTKDGY SVAVVGAGLV GERLVSELRR RRFPLRELRV LARSSRRAIL DGEEFEIGVA 
EPGAFEGVDF AFFAGTEGEK GAAVQLAREA IDRGATVIDN GSDFRLDPRV PLVVPEVNAG 
ALEGHEGLIA NPNCSTIQMV VTLAPLARRF GLRKVVVSTY QAVSGAGRGG VEALQSGAGE 
AFPKPIAGNA IPLIGSVGED GYTSEERKMR EESRKILSLP DLPVYATAVR IPVHTGHSES 
VYVELEREAE PGEVLSAFGE APGISFSGDP DDFPTPLEAA GEPGTFVGRV RVEGDRVSYW 
CVADNLLKGA ATNAVQIAET LVGARVR