| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1091 |
|---|
| Symbol | |
|---|
| ID | 4116112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 1123792 |
|---|
| End bp | 1124874 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638035881 |
|---|
| Product | homoserine dehydrogenase |
|---|
| Protein accession | YP_643869 |
|---|
| Protein GI | 108803932 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCGGG TGGAGCTGGT CCAGCTCGGC ATAGGGCACG TGGGGCGGGC GGTGGCCCAG
ATCGTGCTGG AGGAGCGCAA GCGCTGGCGG GAGAGGTACG GGCTGGACAT CTCCTACCGG
GCGGTCGCCG ACACCTCCGG GGCGCTCGCG GGGGAGGACC TGCTGCCGCA GGCCATAAGG
CTCAAAGAGG CCGGGGGGCG GCTCTCCGAG CTCGGCGCCG AGCCGCTGGA GGAGGTGCTC
GCCGAAGGCC CCGGGCCCAA GACGGCGCGG GTGCTCGTCG ACGCGGCCGC GGGCGAGGGG
ACCTACGACC TCGACGTGCG CGGGGTGCGC AGGGGCTCCT CGCTCGTGCT GTGCAACAAG
GGACCCATCT CCGGGAGCAC CGAGCGCTAC GAGGGGCTCG TCGGCGAGGG GCCGGAGAGG
CTCCGGTACG AGGCCACCGT GGGGGCCGGT GTTCCCGTCC TCTCCACCAT AGAGGCGCTG
CAGGCCTCCG GGGACGACAT CCTGGAGATA CAGGCCAGCC CGAGCGGGAC GCTGGGGTTC
ATCATGAGCG GGGTGGAGGA GGGGAGGCCC TTCTCCGAGG TCGTGCGCGA GGCGGCGGAG
CTCCACTACA CCGAGCCGGA CCCCCGCGAC GACCTCTCCG GCCTCGACGT GGCCCGCAAG
GCCCTCATCC TGGCCCGCAA GATCGGGCGC CGCCTGGAGC CCGAGGAGGT GCCCTACGAG
TCGCTGGTCC CGGAGGAGCT GCGGGAGGTC TCCGTCGAGG AGTTCATGGA GCGGCTCTCG
GAGTTCGACG AGGGTTTCGC CGCCCGGCTC TCGGCCGTGC GGCCCGGCCA CGTGCTGCGC
TACCTGGCCC GCATCCCGAA GGAGGGGCCG GTGGAGGTGG GGCTGCGCGA GGTCCCGGCC
GCGGGTTGCT TCGGCGCTAG GAGCGGCGTG GAGAACGTGT TCAACTTCCG TACGCGGCGC
TACTCGGATG TTACCCTTAC CGTCTCCGGG CCGGGGGCGG GGCCGGAGCG CACCGCGAGC
GGCGTCGTCT GCGACCTGCT GGACCTGGCC CGCAGGGCGG CGGAGAGCGA CGGAGGTTGG
TGA
|
|---|
| Protein sequence | MKRVELVQLG IGHVGRAVAQ IVLEERKRWR ERYGLDISYR AVADTSGALA GEDLLPQAIR
LKEAGGRLSE LGAEPLEEVL AEGPGPKTAR VLVDAAAGEG TYDLDVRGVR RGSSLVLCNK
GPISGSTERY EGLVGEGPER LRYEATVGAG VPVLSTIEAL QASGDDILEI QASPSGTLGF
IMSGVEEGRP FSEVVREAAE LHYTEPDPRD DLSGLDVARK ALILARKIGR RLEPEEVPYE
SLVPEELREV SVEEFMERLS EFDEGFAARL SAVRPGHVLR YLARIPKEGP VEVGLREVPA
AGCFGARSGV ENVFNFRTRR YSDVTLTVSG PGAGPERTAS GVVCDLLDLA RRAAESDGGW
|
|---|
| |