| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1087 |
|---|
| Symbol | |
|---|
| ID | 4116675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 1118527 |
|---|
| End bp | 1119957 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638035877 |
|---|
| Product | prolyl-tRNA synthetase |
|---|
| Protein accession | YP_643865 |
|---|
| Protein GI | 108803928 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0442] Prolyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00408] prolyl-tRNA synthetase, family I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.723439 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGG CGGTCGAGCG GCTCACCAAG AAGAGCGAGG ACTCCAGCAG GTGGTACCTG
GAGCTCGTCC GGATGGCGAA GCTCGCGGAC TACGGGCCGG TCAGGGGCAC CTTCGCCATA
CGGCCGTACG GCTTTGCTAT CTGGGAGCGC ATCCAGGCCG ACCTCGACGC CCGCTTCAAG
GCCACCGGGC ACGTGAACGC CTACTTCCCG CTCCTCATCC CCGAGAGCTA CCTGACGAAG
GAGGCCGAGC ACGTCGAGGG CTTCGCCCCC GAGTGCGCCT GGGTGACGGT GGGCGGCGAC
GACGAGCTGG AGGAGCGCCT CGCCATAAGG CCCACCTCCG AGAGCATCAT CTGCGACTTC
TACCGCAAGT GGATCCACAG CTACCGCGAC CTGCCCGTGC TCATCAACCA GTGGTGCAAC
GTGCTGCGCT GGGAGATGGT GACCCGCCCC TTCTTGCGCA CCGCGGAGTT CCTGTGGCAG
GAGGGCCACA CCGTGCACGC GACCGCCGAG GAGGCGCGCG AGGAGGCCCT GCGGATGCTC
AACGTCTACC GCGACTGCTT CTACGAGGTG CTCGCCATCC CCGTGCTCAC CGGGATGAAG
AGCCCCTCCG AGCGGTTCGC GGGGGCGGTC GAGACCTTCA CCTGCGAGGG GCTGATGGGC
GACGGGCGGG CGCTGCAGGC GGCCACCAGC CACGACCTCG GCCAGAACTT CGCCCGCGCC
TTCGACATCA CCTTCCTGGA CGAGAACCAG GAGCGCGTGC ACCCCTACCA GACCTCCTGG
GGCTTCTCGA CGCGCACCAT CGGCGCCCTG ATCCTGGTGC ACGGCGACGA CCGGGGCCTG
AGGCTGCCGC CGAAGCTCGC GCCGACGCAG GCGGTCGTGG TTCCCATCTG GCGCGGCAAG
AACAAGGGCG AGGTGCGCCG GGAGGCGGAG GCGCTCCACC GCGAGCTCGC GGAGGCCGGG
CTGCGGGCGG AGGCGGACCT GGACGAGGAG CACTCGCCCG GCTGGAAGTT CAACGAGCAC
GAGCTGCGGG GCGTGCCGGT GCGCGTGGAG CTCGGGCCCA AGGACATCGA GAAGGGCCAG
GCGGTGCTGG TGCGCCGGGA CACCGGGGAG AAGGAGTTCG TGGGGCGCGG GGCGGCCGCC
CGCCGGCTCG TCGAGCTGAT GGACGAGATC CAGCAGAACA TGCTCCGGCA GGCCGAGGCC
TTCCGCGACG AGAACACCCG CCGCGCCGAG ACCTACGAGG AGTTCAAGGA GATAATCGAG
GAGAAGCGGG GCTTCGTCGT CGCTCCCTGG GACGGCACCG AGGAGACCGA GCAGAGGATA
AAGGAGGAGA CCAAGGCCAC CATCCGCCTG CTCCCCTTCG AGCGGGAGGA GGGGAAGGAC
CTCGTCTCCG GCAGGCCCGG CAAGACCGCG GTCTTCGCCC GCGCCTACTG A
|
|---|
| Protein sequence | MTEAVERLTK KSEDSSRWYL ELVRMAKLAD YGPVRGTFAI RPYGFAIWER IQADLDARFK
ATGHVNAYFP LLIPESYLTK EAEHVEGFAP ECAWVTVGGD DELEERLAIR PTSESIICDF
YRKWIHSYRD LPVLINQWCN VLRWEMVTRP FLRTAEFLWQ EGHTVHATAE EAREEALRML
NVYRDCFYEV LAIPVLTGMK SPSERFAGAV ETFTCEGLMG DGRALQAATS HDLGQNFARA
FDITFLDENQ ERVHPYQTSW GFSTRTIGAL ILVHGDDRGL RLPPKLAPTQ AVVVPIWRGK
NKGEVRREAE ALHRELAEAG LRAEADLDEE HSPGWKFNEH ELRGVPVRVE LGPKDIEKGQ
AVLVRRDTGE KEFVGRGAAA RRLVELMDEI QQNMLRQAEA FRDENTRRAE TYEEFKEIIE
EKRGFVVAPW DGTEETEQRI KEETKATIRL LPFEREEGKD LVSGRPGKTA VFARAY
|
|---|
| |