Gene Rxyl_1077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1077 
Symbol 
ID4116665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1110176 
End bp1111075 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content73% 
IMG OID638035867 
Producthypothetical protein 
Protein accessionYP_643855 
Protein GI108803918 
COG category[R] General function prediction only 
COG ID[COG1938] Archaeal enzymes of ATP-grasp superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.370003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAGA GATACCTGGA CCTTGAGTGG AGGCCGGAGC TCGAGCGGCC GGTGCTCGTC 
TCGGCCTTCA CCGGCTGGAA CGACGCGGCG GAGGCCGCCA GCATGGCCCT GAGCGCGCTG
GGCAACGCCT GGGGGGTGAG GCGCTTCGGG CGCTTCGACC CCGAGGAGTT CTTCGACTAC
CAGTCCACCC GGCCGCAGGT GAAGCTGGTG GACGGCGTGA CCCGGAAGAT AGAGTGGCCC
GAGAACGCCC TCTACGCCAC CGCCGCGGGG GGCGTGGAGG CGCTGGGGGG GCGGGGGGCA
GTCCTGCTCT CCGGGCCGGA GCCGAACCTC CGGTGGCGGA CGTTCTCGGA GACCGTGGTC
GGGCTCGCGC GGGAGCTCGG GGTGGAGATG GTGGTGACGC TGGGCGCCCT GCTCGCCGAC
GTGCCCCACT CGCGCCCTGT GCCCGTGGCC GCCAACGCCC AGGAGGCCTC GCTGGTGGAG
GATCTGGGCC TGAGCGCCTC GCGCTACGAG GGCCCCACCG GCATAACCGG GGTGCTGCAC
ACCCTGTGCG CAGAGGCCGG CCTGCCCGCG GTGAGCCTTT GGGCCTCCAT GCCACACTAC
CTGCCGGCGG TCCCGTCCGC GCCCGGGGCG CTGGCGCTGG TGGAGAGTTT GGCGGGCCTG
CTGGGCACCG AGGTGGAGAC GGGGGATCTG GAGCGGGGCG CCGAGCGCTA CCAGGAGCAG
GTCTCGGCGG CCGTCGCCCG CGACCCGGAC CTCTCCTCCT ACGTGAAGAT GCTCGAGGAG
CGCTACGACG CCTCCCAGGA GGAGGGGGGC GGGCAGATAA GGCACCTCCC CTCGGGGGAC
GAGCTGGCGC GGGAGCTGGA GGACTTTTTG CGCCGGCAGC GCGGCGAGGA CGAGCAGTAG
 
Protein sequence
MDERYLDLEW RPELERPVLV SAFTGWNDAA EAASMALSAL GNAWGVRRFG RFDPEEFFDY 
QSTRPQVKLV DGVTRKIEWP ENALYATAAG GVEALGGRGA VLLSGPEPNL RWRTFSETVV
GLARELGVEM VVTLGALLAD VPHSRPVPVA ANAQEASLVE DLGLSASRYE GPTGITGVLH
TLCAEAGLPA VSLWASMPHY LPAVPSAPGA LALVESLAGL LGTEVETGDL ERGAERYQEQ
VSAAVARDPD LSSYVKMLEE RYDASQEEGG GQIRHLPSGD ELARELEDFL RRQRGEDEQ