Gene Rxyl_1065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1065 
Symbol 
ID4116945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1100294 
End bp1101037 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content69% 
IMG OID638035855 
ProductMIP family channel protein 
Protein accessionYP_643843 
Protein GI108803906 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID[TIGR00861] MIP family channel proteins 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.547307 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAGAGCT ACATCGCCGA GTTCATCGGC ACCATGGTCC TGATCCTCTT CGGCGACGGG 
GTGGTGGCCG CCGTGCTGCT CAGGGCCTCC AAGGCCGAGA ACTCGGGCTG GATCGTGATC
ACCTTCGGCT GGGGAATGGC GGTCGCCATG GCGGTCTACG CCGTGGGCTG GGTGAGCGGG
GCGCACATCA ACCCCGCGGT CACCGTAGCC CTTGCCGTGG TGGGCCAGTT CGACTGGGCG
CAGGTCCCCG GCTACATCAT CGCCCAGTTC CTCGGGGCCT TCGTGGGGGC GGTGCTCGTG
TGGCTGGCCT ACCTCAACCA CTGGGAGGGC ACGGCCGACC CGGTGCTCAA GCGCGGCGTC
TTCTGCACCA TACCCCAGAT CCGCAACACC CCGGCGAACT TCGTCACCGA GGTGATCGGC
ACCGCCGCCC TGCTGTTCGG CATCCTGGCC ATCCTGGGCA GCGGCGCCCA GATACAGGGC
GGGCAGTCCG AGCTGTTCAC CGCCGGGCTC TTCCCGCTGC TGGTGGGGCT TCTGGTCTTC
GCCATCGGGC TCTCGCTCGG CGGCCCCACC GGGTACGCCA TCAACCCGGC GCGCGACCTC
GGGCCGCGCG TGGCCCACGC CGTCCTGCCC ATCCCCGGCA AGGGCGACTC GGACTGGTCG
TACAGCTGGA TCCCGGTGGT CGCCCCTCTC GTGGGGGGGA TCATCGGCGC GGTGCTCTAC
ACGGTGCTTG GTTTCGGGGA CTAG
 
Protein sequence
MESYIAEFIG TMVLILFGDG VVAAVLLRAS KAENSGWIVI TFGWGMAVAM AVYAVGWVSG 
AHINPAVTVA LAVVGQFDWA QVPGYIIAQF LGAFVGAVLV WLAYLNHWEG TADPVLKRGV
FCTIPQIRNT PANFVTEVIG TAALLFGILA ILGSGAQIQG GQSELFTAGL FPLLVGLLVF
AIGLSLGGPT GYAINPARDL GPRVAHAVLP IPGKGDSDWS YSWIPVVAPL VGGIIGAVLY
TVLGFGD