| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1060 |
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| Symbol | |
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| ID | 4116940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1094633 |
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| End bp | 1095769 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638035850 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_643838 |
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| Protein GI | 108803901 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0114541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGCAG AGAAGACCCA CACGCCTAGC AGGAACGGAG ACCCCGCCGC GGACCGCAGG
GCGGCCCCCG GGCACGACCC GCTCGAGGAC ATCAAGCGGC GGGTGTACCT GGCCTCCCTC
GTGGTCGGCC TCCCCCCCAT ACCGCTGCTC TGGGCCACCG CCCGCCCCGG GGAGCTCTTC
CTGCGCGTCG GGCTGCCGGT GCTCGCCGCG TTCTGCCTGT GGTGCATGTG GGCCCTCTGG
AGCCGCAGGG TCCCGCTCTG GCGGCTCGAG CGGGCGGTCT TCGCCGCCAT CTCCGCCTTC
GTCCTGGGGC AGCTGGCCTT CCGGATCTTC GCCGGCACCG GCTGGAACAT GGACCAGGCC
TCCCTCACCG AGACCACCTA CCCGATGCTG GCCATCCTCT GCATCATCGC CCAGCTCATC
TTCGACACCC AAACCGCCCT CAGGCTCTCC CTGGGGCTCT TCGGAACGGC CACGGCGCTG
GTGGGCGCCG GGGCTCTGGT GGAGGAGAGC GGCCACCGCA TAACCCTCGA CCAGACGGCC
TGGATCGCCC AGCAGAGCGC CTTTCTCGCC GCCGTCATAG CCCTGGTCTA CGCCACCTCC
TACGTGAAGT CCCAGCTCGC CCGCCAGCGG ACCCTCGCCG AGGCGATGCA CCGCCTGGCG
CACACCGACC CCCTCACCGG CATCTCCAAC CGGCGCAGCC TCTACGCCGC CCTGCGCCGG
GAGATGGAGG CCGCCCGGCG CTACGGCAAG CCGCTCTCCG TGATCCTCTT CGACCTCGAC
CGCTTCAAGC TCCTCAACGA CACCTACGGC CACAACCAGG GGGACGCCGC CCTGCGCCGG
GTGGCCCACA CCGCACGCGC CGCGCTGCGC GCCTCCGACC ACCTCGGCCG CTGGGGCGGC
GAGGAGTTCA TCGTGCTCGC CCCGGAGACG GACCTGGACC AGGCCCGGCA CCTGGCGGAG
CGCCTGCGCG AGGCCATAGC CCTCGACCGG CCGCCGGGGC GCCCCCCGCT CACCGCGAGC
TTCGGCGTCG CCTCCTGCAG GCCGGACGAC AGCCCCGAGG ATCTGCTCCG GCGGGCCGAC
GAGGGCCTCT ACCGCGCGAA GGCCGGCGGG CGCAACCGCG CCGAGACCGC CGTCTGA
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| Protein sequence | MEAEKTHTPS RNGDPAADRR AAPGHDPLED IKRRVYLASL VVGLPPIPLL WATARPGELF
LRVGLPVLAA FCLWCMWALW SRRVPLWRLE RAVFAAISAF VLGQLAFRIF AGTGWNMDQA
SLTETTYPML AILCIIAQLI FDTQTALRLS LGLFGTATAL VGAGALVEES GHRITLDQTA
WIAQQSAFLA AVIALVYATS YVKSQLARQR TLAEAMHRLA HTDPLTGISN RRSLYAALRR
EMEAARRYGK PLSVILFDLD RFKLLNDTYG HNQGDAALRR VAHTARAALR ASDHLGRWGG
EEFIVLAPET DLDQARHLAE RLREAIALDR PPGRPPLTAS FGVASCRPDD SPEDLLRRAD
EGLYRAKAGG RNRAETAV
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