Gene Rxyl_1049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1049 
Symbol 
ID4116696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp1085191 
End bp1085883 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content74% 
IMG OID638035839 
ProductTetR family transcriptional regulator 
Protein accessionYP_643827 
Protein GI108803890 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0599696 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGCCC TGGTGCGACG GGAAGGGACC AGAGGGGCGC GGTGGCGGCT GGACCACCTG 
GGGCGGCCTG CGCCGGAGGC GGCCGAGCGC AGCGACGCGG CGCGCAACCG GCGGCGCATC 
GTCGAGGCCG CCCGAAGGCT GTTTGCGGAG CGCGGGGCGT GCGCGGTGAG CATGGAGGAG 
ATCGCGCGCG AGGCCGGGAT CGGGAAGGGC ACCCTCTACC GGCGCTTCCC GCACAAGGGC 
GTGCTCTGCG AGGCCCTGCT CGACGAGCCC ACCCGGCAGC TGCAGGAGGA GACGATGCGC 
GACCTCGCAG ACCCGGGCTC CGGGCCCCTC GAGAAGCTCG ACCGCTTCCT CTCGCGGCTC 
GCGCGCTTCA CCGAGGAGAA CCTGGACCTC CTCTACGGCG GGCACGAGCC CCTCTCGGGC 
GAGGCGCGCG TCGCGTACTA CTCGCACCCG GCCCACCAGT GGCGCCGCTG GACGGTGCTC 
GGGCTCCTGC GGGCGGCGGT GAGGGAGGGG GCTCTCGGCG AGGAGCTCGA CGTGGAGTAC 
CTCTCCGAGG CGCTGCTCGC GCCGCTGGGG GTGGACCTCT ACTACCACCA GCGGCGGGTA 
CAGGGTATGA GCGCCGAGAG GATCGCGGCC GGGCTCAGGT CGCTCGTGCC CGGGCGCGGC 
GGAGGGTTGG CGGAGCGGGA GAGGAGGGTG TAG
 
Protein sequence
MEALVRREGT RGARWRLDHL GRPAPEAAER SDAARNRRRI VEAARRLFAE RGACAVSMEE 
IAREAGIGKG TLYRRFPHKG VLCEALLDEP TRQLQEETMR DLADPGSGPL EKLDRFLSRL 
ARFTEENLDL LYGGHEPLSG EARVAYYSHP AHQWRRWTVL GLLRAAVREG ALGEELDVEY 
LSEALLAPLG VDLYYHQRRV QGMSAERIAA GLRSLVPGRG GGLAERERRV