| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1048 |
|---|
| Symbol | |
|---|
| ID | 4116695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1084594 |
|---|
| End bp | 1085130 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 638035838 |
|---|
| Product | DoxX |
|---|
| Protein accession | YP_643826 |
|---|
| Protein GI | 108803889 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2259] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.083791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGACC TGTCGGCGGC GCTGTTGAGG CTGGTGGTCG GCGGGCTCGT CGCCGGCCAC
GGGGCACAGA AGCTCTTCGG GTGGTTCGAC GGGCCCGGGA TGGAGGGGAC GAGCGGGTTT
ATGGAGTCGC TCGGCCTGAG GCCGGGGCGC ACCTGGGCGG CCATCGGCGG GGCCTCGGAG
TTCGGCGGTG GCACCCTCAC CGCCCTGGGC CTCCTGAACC CGCTCGGCCC GCTGGGGATA
ATCGCGGCGA TGTCCATGGC CACCGCAACG GCCCACCGCG GGAAGCCCAT CTGGGTCACC
GAGGGCGGGG CGGAGCTTCC GGTGACGAAC GCGGCGGTGG CGGCGGCCCT GATGCTGAAC
GGCCCCGGAC GCTACTCCCT GGACCGGGCC CTCGGCGTCC GGCTGCCGGG CTGGCTGGCC
CCGCTGGGGC TGCTGGCCAT CGCGCTGGTG GTCTACCGCT ACGGGGTGCA GGCGGAGCCG
CAGCAGCAGG AGGAGCCGCG CGAGGGGCTC GCCGGGGGCG AGCAGCAGCC CTCCTAG
|
|---|
| Protein sequence | MRDLSAALLR LVVGGLVAGH GAQKLFGWFD GPGMEGTSGF MESLGLRPGR TWAAIGGASE
FGGGTLTALG LLNPLGPLGI IAAMSMATAT AHRGKPIWVT EGGAELPVTN AAVAAALMLN
GPGRYSLDRA LGVRLPGWLA PLGLLAIALV VYRYGVQAEP QQQEEPREGL AGGEQQPS
|
|---|
| |