| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1047 |
|---|
| Symbol | |
|---|
| ID | 4116694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 1083344 |
|---|
| End bp | 1084597 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 638035837 |
|---|
| Product | arsenical pump membrane protein |
|---|
| Protein accession | YP_643825 |
|---|
| Protein GI | 108803888 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.288237 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTCGCCG GCGGGCTGCT CGCCGCGACG GTGCTGCTGG TGCTCGTCCG GCCCGGCGGC
GTGGGGGAGG CCTGGTGGGG TGCGGCCGGC GGGGCGCTGG CGCTCGCGCT CGGGCTCGTC
GGGCCCGGGG AGGCGCTCGG GGCGCTGGGG GAGATGCGGG AGGCCTTCAT GCTGCTCGCG
GGGATGGTGC TCCTCGGCGG GGTGGCCGGG AGGGCCGGCT TCTTCGAGGG GGTCGCGGCG
CTCGCGGCGC GCGCGGGCGG GGGGCGGACG GGCCGGCTGT TTCTCATGGT CTTTCTGGCG
GGCTCGGCGG TCACCGCCGT GCTTTCGCTC GACGCCACGG CCGTGGTGCT CACGCCCGTG
GTGTGCGCCA TGGTCGCCCG CCTGGGGCTT CCCCTGCTGC CCTTCGCCTT CGCCTGCGTC
TACGCGGCCA ACACGGCCTC GCTGTTTCTC CCGGTCTCCA ACCTGACCAA CCTGCTGGCC
TACGACGCCC TGGACCTCGG CTTTCTGCGC TTCGCCGCCG TCATGCTGCT CCCCGGGGCG
CTCGCCGTGG CGGCCAACGC CGCCGTGCTG GGGGCCCTCT TCCGGAGGGA ACTGGCCGGC
GGCTACCGCC TCTGCGGCTT CGAGCCCGAG AACCCGGCCT TTCTGCGTCT CTCGGCCGCG
GCGGTGGCCG GGGTGCTCGT CGCGCTGCCC GCGGCCTCCG CGCTCGGGGT GCCGGCCGGT
CCGGTGGCCC TCGCCGGCGG GGCCGGACTC GCCGCGGCGG CGCTCACGCG GGGCTGGATG
GGGACGGGGG AGGCCGTCCG GTGCGTGCCC TGGGGCCTGC TCGCGCTGGT CGCCGGGCTC
TTCGTCGTCG TGCGGGCCGC GGGGGACGCC GGGCTCGCGC GGCTCCCCGA GGAGCTGCTG
CTCCGGCTGT CCGCAGAGGG CGGTCTGGCC GGCCTGCTCG GGGTCGCGGC GGTCGCCGCG
CTGGGCTCCA ACCTCATCAA CAACCTCCCC CTGCTGGCCC TCTCCCTGGA GGCCGCGGGG
CGGGCCGGGG AGCCGGCGGT CTACGCCCTC CTGCTCGGGA CCGACATAGG GCCCAACCTG
GCCTTCACCG GATCTCTCGC CACCCTCATC TGGCTCGGCC TCGTGCGCGA GCGGGGGATG
GAGGTGGGGG CGGGCCGCTT CCTGGCCGTC GGGCTCGCGG CCACGCCCCC GGCGCTGCTC
GCCGCCGTCC TGGGGCTGTG GGTCTCGCTG CGGCTCGTCG CCGCGGGGCC CTAG
|
|---|
| Protein sequence | MLAGGLLAAT VLLVLVRPGG VGEAWWGAAG GALALALGLV GPGEALGALG EMREAFMLLA
GMVLLGGVAG RAGFFEGVAA LAARAGGGRT GRLFLMVFLA GSAVTAVLSL DATAVVLTPV
VCAMVARLGL PLLPFAFACV YAANTASLFL PVSNLTNLLA YDALDLGFLR FAAVMLLPGA
LAVAANAAVL GALFRRELAG GYRLCGFEPE NPAFLRLSAA AVAGVLVALP AASALGVPAG
PVALAGGAGL AAAALTRGWM GTGEAVRCVP WGLLALVAGL FVVVRAAGDA GLARLPEELL
LRLSAEGGLA GLLGVAAVAA LGSNLINNLP LLALSLEAAG RAGEPAVYAL LLGTDIGPNL
AFTGSLATLI WLGLVRERGM EVGAGRFLAV GLAATPPALL AAVLGLWVSL RLVAAGP
|
|---|
| |