Gene Rxyl_1044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1044 
Symbol 
ID4116691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1080381 
End bp1081580 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content72% 
IMG OID638035834 
Producthypothetical protein 
Protein accessionYP_643822 
Protein GI108803885 
COG category[S] Function unknown 
COG ID[COG3273] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGAAG CTCAACCCAG AAACCTCAAG GACATGCTCG CCGAGGCCAA GGACACCTCC 
GAGCTCATGG TGGACCTGGC ATACGCGGCG ATCCTCTACG ACTCCGAGGA CATCTCCGAG
GAGGTCTTCC GGCTCGAGGA GCGGCTCAAC CAGCTCGTCT TCGACATGCG GACGCTCGCG
GTGCTCGCCG CCCGCAGCCC CTCCGACGCC GAGCAGATGG CCGGCATCCT GCAGGTCGTG
CAGGACATCG AGAAGATCGG CAACGCCGCC TACGACATCG CCAAGATCGT GGTGAAGCGG
CTCGGGATAC CGCCGGAGCT CCTGCACGAC ATCCCGGAGG CCGAGGAGAT CCCCTCCCGC
GTCCGGGTGC ACGCGGGCAG CGCCCTCGAC GGCAGGAGCC TGGAGGAGAT AGACCTCCCG
GTGGAGACCG GGATGCGCCC CATAGCCGTC CGCTCGGGCG ACGAGTGGCA CTTCGACCCC
GGGCCCGAGC AGGTGCTGCG GGCGGGGGAC GTGCTCTTTC TGCAGGGCCC CCCGGAGGGG
GTGGCCGAGC TGAGGGAGCT GGCCGGGGCG CCGCCGCTGC GCCGCCCGGA GCCCGCCGGG
CCCTCCGGGC CGCTCTCCGA GCTGGAGCGG GCGGTGGACA TCCTCATCGA GATGAAGAAC
ATCTCCGAGG TGGCGGTCGG GCTGGCCTAC TCCGCCCTCC TCTACCGCGA CGCCGGCCTC
GCCCGCGAGG TGGTGGCCAT CGAGGACGAG ATGGACGAGA TGCGCTACCG GCTGGAGCGC
TGGGTGCTGC TGGCCGCCTC CCACGTGGAG GAGCCCGCCC GGCTGCGCGG GCTGCTGCAC
CTGGCCACCG CCTCCGAGAC CATCGCCGAC TGCGCCAAGG AGATGGTGTG GATGGTCGAG
CAGGGCGAGG AGATACACCC CGTGCTCTCC GCCGCGGTCG GCGAGTCGGA CGAGGTGGTC
TTCAAGCTCG CCGTCGCCCC CGGCTCCCGG GCCGACGGCG AGACCCTGCG CGCGCTGCAC
CTGGAGACCG AGACCGGTAT GTTCGTGCTG GCGGTGAGCC GCGGGGGGCG CTGGGCCTAC
CGGCCGCGCG ACACCTTCAG GCTGCGGGGC GGCGACGCGG TGCTCTTCAC CGGGGCCCCG
GAGGGCCTCG AGCCCCTCGC GGAGCTCTTC GGCCACGACC TGGAGGAGCT GGCGGAATAG
 
Protein sequence
MREAQPRNLK DMLAEAKDTS ELMVDLAYAA ILYDSEDISE EVFRLEERLN QLVFDMRTLA 
VLAARSPSDA EQMAGILQVV QDIEKIGNAA YDIAKIVVKR LGIPPELLHD IPEAEEIPSR
VRVHAGSALD GRSLEEIDLP VETGMRPIAV RSGDEWHFDP GPEQVLRAGD VLFLQGPPEG
VAELRELAGA PPLRRPEPAG PSGPLSELER AVDILIEMKN ISEVAVGLAY SALLYRDAGL
AREVVAIEDE MDEMRYRLER WVLLAASHVE EPARLRGLLH LATASETIAD CAKEMVWMVE
QGEEIHPVLS AAVGESDEVV FKLAVAPGSR ADGETLRALH LETETGMFVL AVSRGGRWAY
RPRDTFRLRG GDAVLFTGAP EGLEPLAELF GHDLEELAE