Gene Rxyl_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1038 
Symbol 
ID4116685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1073628 
End bp1075079 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content75% 
IMG OID638035828 
Productaromatic-L-amino-acid decarboxylase 
Protein accessionYP_643816 
Protein GI108803879 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0076] Glutamate decarboxylase and related PLP-dependent proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGCGCC GGAGGGCGCA GCAGGACCCG GCGACCCCGC AGCACGAGCG GGCCGACCTC 
CCCGCGCTCG CCGACCGCGA GGGGGTGCTG GAGGAGCTGG TGCGCGTGAT CTGCGAGGCG
TGGGCGTCGT TCGACGTGCC GCGCACCGCG GAGCCGCAGC TCGGCGAGGA GCTGGCCGCG
CGCCTCGTCG CGCCGCTGCC CGAGGAGCCC GGCGGGGTTG AGGAGGCCCT CTCCGACGCC
GTGCGGGTGC TCGACGCCAG CGTCTCGCCC TCGCGCCCGC TCAACCTCGG CTACATCGGC
TCGACGGGCC TCGAGATGGG CGTGCTGGCC TCGGCGCTCG CGGCCACCTA CGACGCGAAC
CTCGCCGTCA CGGCGGGAGG GGCGGACCTA GTCGAGGAGC AGGCCCTGCG CTGGCTTTCG
GACTTCGTCG GCTTCCCGCT CGCCGAGGGG GCCTTCACGA GCGGCGGCAT GACCTCGAAC
CTCACGGCGT TGCTGGCGGC CCGCGAGCGG GCGCTCCCCG GCTCGCGCGC CGGGGGGCTC
TACGGTCGCC GGGCGGCGGC CTACTGCTCG GAGGAGGCCC ACCACTCCGT GGTCCGCGCC
GTCGAGGTCT GCGGGCTCGG GGGAGGGTCC GTCCGGCGCA TCCCGCTCGA CGGCCGGCGC
CGGATGCGCC CGGACGCGCT CGAGGAGGCG CTCTACCAAG ACGTCGCCGC CGGCATTGTG
CCCGTCGCCG TGGTTGCGAC CGCGGGCACG ACGCTCACGG GCGCCGTGGA CCCGCTGGAC
GAGGTCGCCG ACGTCTGCGA GCGCCACGGC GTGTGGCTGC ACGTGGACGG CGCCTACGGC
CTCCCGGCCG CCGCCGTCCC GCAGACCGCT CCGCTCTTCG CCGGGCTCGA GCGTGCCGAC
TCGGCGACCG TGGACGCCCA CAAGTGGCTC GGGGTGCAGA AGAGCTGCAG CGCCGTGCTG
CTGCGCGAGA CCGGGCGGCT GCGGGCGGCG TTCGGCCACG AGGAGCGCTA CATGCTGCAC
GAGGGCGACG TCCCCAACCC GGTGGACCGC ACGCTCGAGT ACTCGCGCCC GCTCCGTTCT
TTGAGGCTGT GGATGGCCTT CCGCGTCCAC GGCGCCGCCC AGTACAGGAT CTGGATCCGG
CGCACCCTCG AGAACGCCCG GCTGCTCGCC GCCCTCCTGC GCGAGGCGCC CGACTTCGAG
CTCCTCCACG AGCCGACGCT CTCCACCGTC TGCTTCCGGC ACCTCCCGCC CGGCGCAGAA
GACCCCGACG AGCACAACCT CCGCCTCGCC CGAGAGATGC AGCGCGACGG GCGCGTCTTT
CTCGCCCCGG CCTCCGTGGA CGGCCGGGCC TGCCTGCGCG CCTGCTTCGT CAACTTCAGG
ACCACGCCCC GCGAGGTCGA GCGCGTGATC TCCGTCGCCC GCGAGCTCGG TGGCCGGCTG
GCCCGCCCCT GA
 
Protein sequence
MRRRRAQQDP ATPQHERADL PALADREGVL EELVRVICEA WASFDVPRTA EPQLGEELAA 
RLVAPLPEEP GGVEEALSDA VRVLDASVSP SRPLNLGYIG STGLEMGVLA SALAATYDAN
LAVTAGGADL VEEQALRWLS DFVGFPLAEG AFTSGGMTSN LTALLAARER ALPGSRAGGL
YGRRAAAYCS EEAHHSVVRA VEVCGLGGGS VRRIPLDGRR RMRPDALEEA LYQDVAAGIV
PVAVVATAGT TLTGAVDPLD EVADVCERHG VWLHVDGAYG LPAAAVPQTA PLFAGLERAD
SATVDAHKWL GVQKSCSAVL LRETGRLRAA FGHEERYMLH EGDVPNPVDR TLEYSRPLRS
LRLWMAFRVH GAAQYRIWIR RTLENARLLA ALLREAPDFE LLHEPTLSTV CFRHLPPGAE
DPDEHNLRLA REMQRDGRVF LAPASVDGRA CLRACFVNFR TTPREVERVI SVARELGGRL
ARP