Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1037 |
Symbol | |
ID | 4116684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 1072102 |
End bp | 1073631 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638035827 |
Product | amino acid permease-associated region |
Protein accession | YP_643815 |
Protein GI | 108803878 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.809227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCAGCA CGGAATCCGC TCCCGCGCCC GCGCGGGCGA CGGGCGAGAG CGCCAAGCTC CACCGCCGTG CGCTCGGGGT GCCGGATCTG GTGTTCTTCA TCGTGGCGGC CTCGGCGCCG CTCACGGCGG TGGCGGGCGG GCAGGCCGCC ACCTACCTGG TCACCGGCAA CAGGGGCGTC CCGTTCATGT TCGTCCCCTT GGGGATCATC CTCGCCCTCT TCGCCGTCGG CTACGCGGCG ATGAGCCGCC ACGTGGCCAA CGCGGGGGCG TTCTACTCCT ACGTCGCCCG GGGGCTCGGC AAGGTGCCGG GCGTGGGGGC GGCCTTCGTC GCGCTCATCG CCTACAACGC GATGCAGATC GGGATCTACG GCCTCTTCGG CGTGGCGATG GGGGCGTTCA TGGGCTCGCA GCTCGGCATA GAGCTGCCCT GGTGGGCCTG GTGCCTGATC GGCGCCGGGG TAATCGGGGT GCTCGGGGTG CTGCAGATAG ACCTCAACGC CCGCGTGCTC GCGGTGGCCC TCATCCTCGA GGTGATCGTG GTCGCGCTCT TCGACCTCGC CGTGCTCGCC GACCCCGGCC CGCAGGGGCT CTCCCTCGTC GGCTTCGACC CGACGGTCGC CTTCGGGGCG GCGGCGGGCG CGACGCTCAC CTTCTGCGTC GCCTCTTTCG TCGGGTTCGA GTCGGCGGCG ATCTACTCCG AGGAGTGCCG CGACCCCCGG CGCACCGTGG CGCGGGCGAC GTTCATCGCG GTCGGCCTGA TCGCGCTCTT CTACGCCCTC TCGAGCTGGC TGCTCGCGGT CGCCGCCGGG CCGGACACGA TCGTGGACCC GGCGCGGCTG GTGGAGGCGG GCTTCGCCAC CGCAGGCAAC CCCGACCCGA CGACGGTGCT CTTCGTCGCG GGGGCCGAGC GCCTCGGCGC GATCTGGGGC AGCGCCGCGG CGCTGCTCTT CGCCACGAGC CTCTTCGCGG CGCTCCTCTC GTTCCACAAC GCGGTGGCCC GCTACGCCTT CGCGCTCGGC CGCGAGGGCG TCCTCCCGCG GGCCTTCGGC TACGTGCACG CGATCACCGG GGCGCCCGTG ATCTCCTCGC TGGCGCAGAC CGTCCTCGCG GTCTCGGTCG TCGGGGTCTT CGCCCTCGCC GCCGCCGACC CGGTGCTGAC GCTCTTCACG TGGCTCACGA ACCTGGGCGC CCTCGGCGTG CTGCTCCTTA TGACGGTCAC CTCCTTTGCC GTCGTGGGCT ACTTCCGGCG GCGCCCGGAG GAGGGGCTCG GCCGCTGGAC GACCGCGGTG GCCCCGGCCG TCGCGGGCGC GCTCCTGCTC GTCGTCCTCG TCCTCGGCGT CGCCAACTTC AACGTCCTCA TCACCGGCTC GACCGAGGCC CCGACGAGCG CCATGACGAT AGTGCTGCCC GCGATCCTGT TCGGCGGCGG TCTCCTGGGG CTCGCCGTCG GGGCGATCCT CAAGGTGCGC CGCTCCGAGG TCTACCGCAG AATCGGGGAG GGAGGGGCGG AGCCCCCGGA GGGGGCGTGA
|
Protein sequence | MSSTESAPAP ARATGESAKL HRRALGVPDL VFFIVAASAP LTAVAGGQAA TYLVTGNRGV PFMFVPLGII LALFAVGYAA MSRHVANAGA FYSYVARGLG KVPGVGAAFV ALIAYNAMQI GIYGLFGVAM GAFMGSQLGI ELPWWAWCLI GAGVIGVLGV LQIDLNARVL AVALILEVIV VALFDLAVLA DPGPQGLSLV GFDPTVAFGA AAGATLTFCV ASFVGFESAA IYSEECRDPR RTVARATFIA VGLIALFYAL SSWLLAVAAG PDTIVDPARL VEAGFATAGN PDPTTVLFVA GAERLGAIWG SAAALLFATS LFAALLSFHN AVARYAFALG REGVLPRAFG YVHAITGAPV ISSLAQTVLA VSVVGVFALA AADPVLTLFT WLTNLGALGV LLLMTVTSFA VVGYFRRRPE EGLGRWTTAV APAVAGALLL VVLVLGVANF NVLITGSTEA PTSAMTIVLP AILFGGGLLG LAVGAILKVR RSEVYRRIGE GGAEPPEGA
|
| |