| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1029 |
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| Symbol | |
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| ID | 4116715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1063456 |
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| End bp | 1064343 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638035819 |
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| Product | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase |
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| Protein accession | YP_643807 |
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| Protein GI | 108803870 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000527946 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGACA TGGGCTTTAC AGAGGCGATA GAGGCCGGGT ACGGGGTGAG GGTGTTGCAC
GGCGGGGAGC CCAGGTGGGG CCGGCGGGAG GGGGAGGAGA TCCTGCTGGA GAGCGGGGAG
CGCATCCCGG AGGCGGGGGC GCGGTATCTC GCGCCGGCGG AGCCGACGAA GATCATCGCG
GTGCACCTCA CCTACCGGAG CCGGGTCGAG GAGTACGGGG CGCGCGTACC GCCCGAGCCC
TCGTACTTCC TCAAGCCGCC GACGGCGCTC AACGGGCACC GGGGGGTGGT GCGGTGGCCG
GCGGGGACGC GCTTTCTCAA CTACGAGGGA GAGCTCGCGG TCATCGTCGG GCGCCGGATG
AAGGGCGTGG GCATGGAGGA GGCGCTCTCC TGCGTCGCCG GCTACACCTG CGCCAACGAC
GTGGGGCTGC ACGACTTCCG GCACGCCGAC CGCGGGTCGA TGCTGCGGGT GAAGGGGCAG
GACGGCTTTC TGCCGCTCGG GCCCGAGGTG GTGCCCGCCT CGCGGTTCGA CCCCGAGGAC
TTCGCGCTGC GCACCTACCT CAACGGCGAG GTCGTGCAGG AGGGCGGGGC GGAAGACCTG
CTCTTCGGCG TAGCCTACCA GCTCGCCGAC CTGTGCCGCC TCATCACGCT CGAGCCCGGC
GACGTGGTGC TCACCGGTAC GCCGGCCAAC TCCCGGCCCA TGCGGCCCGG CGACGTGGTG
GAGGTCGAGA TAGAGGGCAT AGGCCGGCTC TCCAACACCG TCGAGGAGTG GGAGGTGGAC
CTCTCCGGCC CCGGCGAGCG GCCCGAGGTC TCGGCCAGCA CGCTGCACGT CGCGCTCGCC
GTCCCCGAGG ACGAGGCCGA GCGGCTGGCG GCGGGGGAGG CGCGGTGA
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| Protein sequence | MSDMGFTEAI EAGYGVRVLH GGEPRWGRRE GEEILLESGE RIPEAGARYL APAEPTKIIA
VHLTYRSRVE EYGARVPPEP SYFLKPPTAL NGHRGVVRWP AGTRFLNYEG ELAVIVGRRM
KGVGMEEALS CVAGYTCAND VGLHDFRHAD RGSMLRVKGQ DGFLPLGPEV VPASRFDPED
FALRTYLNGE VVQEGGAEDL LFGVAYQLAD LCRLITLEPG DVVLTGTPAN SRPMRPGDVV
EVEIEGIGRL SNTVEEWEVD LSGPGERPEV SASTLHVALA VPEDEAERLA AGEAR
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