Gene Rxyl_1018 details

Gene Information

• Locus tag: Rxyl_1018
• ID: 4116704
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: +
• Start bp: 1052874
• End bp: 1054832
• Gene Length: 1959 bp
• Protein Length: 652 aa
• Translation table: 11
• GC content: 78%
• IMG OID: 638035808
• Product: metal dependent phosphohydrolase
• Protein accession: YP_643796
• Protein GI: 108803859
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2206] HD-GYP domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain; [TIGR00277] uncharacterized domain HDIG

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCGCTCCG GCTCGGTGCC GGGTGAGCCC CTGACGACCG GTCTGCTCCG GGCTGTCGCG 
GGCGCGGCTC TCTTCGCCCT TCTCGCCGCG GGGCTCGGGG AGGGGGCCGC GGCCTACGCC 
GGCGCGGCGC TGCTCGCCGG CTTCGGGCTG CTGTGGGCCT CGGGCCGCCC GCGGCGGCTG 
CTCGGGGAGC CGCTCGTCCC GCTGCTCGCC GACGCCTGCG CCGTGAGCCT GCTCGTCCTG 
GGGACCGGGG GGCCGGGCTC GCCCCTCCTC CCGCTCTACT TTCTCGCCGC GCTGGGTCTG 
GTCCGCGCCG GGGAGACCTG GCGGCAGGTC GCCGGGGGAG GCGCGCTCGT GGGCGGCTTT 
CTGGCCGCCG CGTGGCCCGT GCCGGCCCCG GCCCTTCTGG GGGCGGGGAT GCTCGCCGCC 
TTCTGTTGCG GGGCGGCGGC GTTGGGGCGC GAGCTGCGCG GGCTCTCCGG GCGCGGCCGG 
GAGCTCGCCG CCCGGGCCGC CGAGGAGCGG GAGCTCGCCG GGCGGCTCGC CGCCCTGGGC 
GAGAGGCTCG GGCCGGTGCT GGGGATGCTG GAGCCGGAGA GGGTTCTGGA GTGGGCCGCC 
GGGACGGCCC GGGACCTCTG CGGCGCCGCC TACGCCCACG CCGTGCTGCT GGACGGCAAC 
GTGCACCGCA CGAGCATGGG CGGGGACTTC CCGGCCTGCC CCACCTGGTG GCACCCGGCG 
GTGCAGGAGC TCGTGCTCCG CGGCGCCCGC GGCGGGGAGA CCGTCCGCCG GCCCGGGCTC 
GAGGTGCACG GCCTCGAGGG GTTCATCGCC GTCCCCGTGG AGGCGCCGGG CGGCGGGGCG 
CTGGTGGTCG GGGGCGGCCG GTTCGGGGAG GTGGAGGAGC GGCTGCTGCG GGCCCTCGCC 
GGGCAGCTCT GCGCCGCCCT GCAGGACGGC GGCGGGGCCC CGGGCGGACG GGACGCGGTC 
ACCGGGCTGC CCAACCGGGC CTCCCTGCAC CGGGTGCTGC GCAAGGAGCT CGCCTACGGC 
GGGGCGGCGG GCGTCGTCTC CCTGCGGCTC GGGGGGCTCG AGGACTACGC GCGGTCGCAG 
GGGATGGCGC TCTCCGAGGC GCTCGTGCGG CGCATCGCCG GGCGGCTCGC CGGGCGCCAC 
CGCGCCTTCC GCTACGGGGT GGACGAGTTC TGTCTTCTGG TGCGCGGGGC GGACGAGGAC 
CGCGCCCGCG GGGTCGCCCG CTGGGCCCTG GACGTGGTGC GCGAGGTGGC TGGGGACCTG 
GAGGCATCCG CCGGGTACGC CGTCTCCTCC GGCGGGGCCC GGGGGCCCGA GGAGCTGCTC 
GCCCTTGCGC GCAGGCCGCT TCCGGAGGGG GGCGGGGAGG CGCGGCGCGG GCTCGAGGTC 
GAGGTCCGGG AGGTCGTGGA AGCCCTGCAC GAGGCGGCCA GCGTGCGGGA CCCGGAGCTC 
GGGGAGCACA TGCGCGAGGT CTCCCGGATC GCGCGCCGGG TGGGGGAGAG GCTGGGGCTC 
TCCCCGCAAG AGCTCGAGGC GCTCACCTAC GGCGCCCTCC TGCACGACAT AGGCAAGCTC 
GGCGTCCCCG ACGCCATCCT CAACAAGCCC TCCGCGCTCT CCCCGCGGGA GTACGAGGCC 
GTCAAGCGCC ACACCGAGCA CGGCGCCAGG ATCCTGCGGC GCGTCAGGGC CCTCTCCGAG 
GCCATGCTCG CCGTCAGGCA CCACCACGAG CGCTTCGACG GCGCGGGCTA CCCTGACGGG 
CTGCAGGGGG CGGACATCCC GCTTCTGGCC CGGATAGTCT TCGTGGCCGA CGCCTTCGAC 
TCCATGACCC GCAGCCGCCC CTACCGCGGC GGGGCCTCCA GGCGGGAGGC CTTGCGGGAG 
ATAGCCCACA ACTCCGGCAG CCAGTTCGAC CCGCGGGTCG TGGACGCCCT GTTCGAGGTC 
ATGGAGGAGC TCGGGCGGCG GAGGAGCGCC TCCGCCTGA 

 

Protein sequence

MRSGSVPGEP LTTGLLRAVA GAALFALLAA GLGEGAAAYA GAALLAGFGL LWASGRPRRL 
LGEPLVPLLA DACAVSLLVL GTGGPGSPLL PLYFLAALGL VRAGETWRQV AGGGALVGGF 
LAAAWPVPAP ALLGAGMLAA FCCGAAALGR ELRGLSGRGR ELAARAAEER ELAGRLAALG 
ERLGPVLGML EPERVLEWAA GTARDLCGAA YAHAVLLDGN VHRTSMGGDF PACPTWWHPA 
VQELVLRGAR GGETVRRPGL EVHGLEGFIA VPVEAPGGGA LVVGGGRFGE VEERLLRALA 
GQLCAALQDG GGAPGGRDAV TGLPNRASLH RVLRKELAYG GAAGVVSLRL GGLEDYARSQ 
GMALSEALVR RIAGRLAGRH RAFRYGVDEF CLLVRGADED RARGVARWAL DVVREVAGDL 
EASAGYAVSS GGARGPEELL ALARRPLPEG GGEARRGLEV EVREVVEALH EAASVRDPEL 
GEHMREVSRI ARRVGERLGL SPQELEALTY GALLHDIGKL GVPDAILNKP SALSPREYEA 
VKRHTEHGAR ILRRVRALSE AMLAVRHHHE RFDGAGYPDG LQGADIPLLA RIVFVADAFD 
SMTRSRPYRG GASRREALRE IAHNSGSQFD PRVVDALFEV MEELGRRRSA SA