Gene Rxyl_1010 details

Gene Information

• Locus tag: Rxyl_1010
• ID: 4116228
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: +
• Start bp: 1046089
• End bp: 1046550
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 638035800
• Product: heat shock protein Hsp20
• Protein accession: YP_643788
• Protein GI: 108803851
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0071] Molecular chaperone (small heat shock protein)

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00224234
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGAGCC CGTTCAGAGG CTTCTGGGAT GTCCGCAGCG AGCTGGACCG GATGTTCGAT 
GATGTGGTGC GGGATGCGTT CCGGCTGTGG CGCGGCGAGG GGCGCGCGGC GAGGACGGCC 
GAGTGGGCTC CTGCGATAGA CGTCTACAGC AAGGACGGCG ACCTGGTGAT AAAGGCCGAG 
CTTCCCGGGA TGAAGCCGGA GGACGTGGAC ATAACCCTGC AGGAGGGGGT TCTGACCATC 
TCTGGGGAGC GCAAGGCCGA GGAGGAGCGC GAGGGCGCCG GCTACTTTGT GAGGGAGCGG 
CGCTACGGCT CGTTCCGCAG GAGCATGCGT CTGCCTGAGG GGGTGGACGA GAGCAAGATC 
CACGCTCGCT TTGAGGATGG GGTGCTTGAG GTTGTGGTTG AGGGGGCTGG TGCGGTGACC 
GAGCCCCGCA GGATCCAGAT AGAGGCCCCG AAGGGCTCCT AG 

 

Protein sequence

MLSPFRGFWD VRSELDRMFD DVVRDAFRLW RGEGRAARTA EWAPAIDVYS KDGDLVIKAE 
LPGMKPEDVD ITLQEGVLTI SGERKAEEER EGAGYFVRER RYGSFRRSMR LPEGVDESKI 
HARFEDGVLE VVVEGAGAVT EPRRIQIEAP KGS