| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1008 |
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| Symbol | |
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| ID | 4116226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1044367 |
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| End bp | 1045236 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638035798 |
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| Product | RNA polymerase, sigma 28 subunit |
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| Protein accession | YP_643786 |
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| Protein GI | 108803849 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000100967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGAACG TGAGGCCGCA GCGAACAGAG CGCGAAAACG AGACGCCGGA GCTGATCCCC
GGCTACTTCG CCCGCATAGA CAAGGGGGAG CTCCTCACGC ACCAGGAGGA GATAGAGCTC
TCCAGGAGGG CCAAGAAGGG CGACAGAAAG GCCCGCCAGA AGCTCATAGA GAAGAACCTG
AGGCTCGTTG TCTCGGTGGC CAAGAAGTAC CGCGGCTACG GGCTGCCCTT CGAGGATCTC
ATCCAGGAGG GCAACATAGG GCTCATGAAG GCGGTCGAGA AGTTCGACCC CGAGCGGGGC
TTTCGCTTCT CTACGTATGC GACGTGGTGG ATAAGGCAGG CCGTGCAGCG GGCGGTTGCG
GACAAGGGCC GCACCATAAG GGTGCCGGTG CACATGACCG AGAAGATCCG CAAGATGGCC
CGCACGTACA ACGAGCTCTC CGCGCAGCTA GAGCGGGAGC CCACCGACGA GGAGGTCGCC
GAGGCGCTCG GCTGGACGCC CGAGGAGGTG CGCGAGGTGA AGGGCGCCAT GCCCGACGCC
ACGAGCCTGA ACCAGCCGCT CAGCTCCGAT GAGGACTCCT CGGAGATAGG GGAGTTCGTG
GAGGACGAGC GGGCCTCCGA CACCGCCGGC GCCGTGGCCC GCGACATCGA GAACGCAGCG
CTCCGCAAGG CCATAGAGCG GCTGCCGGAG CGCAACCGCC ACGTGCTGGT GAGGCGCTAC
GGCCTCGACG ACCGGGAGCC GGCCACGCTG GCGGAGCTCA GCGAGGAGCT GGGCGTCTCC
CGGGAGCGGG TCAGGCAGCT GCAGCGCGAG GCCGAGCGCA TGATCCAGGA GAGCGAGTTC
GGCGCCGTGC TCGGCGGCGC GGCCGCCTGA
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| Protein sequence | MENVRPQRTE RENETPELIP GYFARIDKGE LLTHQEEIEL SRRAKKGDRK ARQKLIEKNL
RLVVSVAKKY RGYGLPFEDL IQEGNIGLMK AVEKFDPERG FRFSTYATWW IRQAVQRAVA
DKGRTIRVPV HMTEKIRKMA RTYNELSAQL EREPTDEEVA EALGWTPEEV REVKGAMPDA
TSLNQPLSSD EDSSEIGEFV EDERASDTAG AVARDIENAA LRKAIERLPE RNRHVLVRRY
GLDDREPATL AELSEELGVS RERVRQLQRE AERMIQESEF GAVLGGAAA
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