| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0979 |
|---|
| Symbol | |
|---|
| ID | 4117210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 1017423 |
|---|
| End bp | 1018940 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638035763 |
|---|
| Product | argininosuccinate lyase |
|---|
| Protein accession | YP_643757 |
|---|
| Protein GI | 108803820 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0165] Argininosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAC TTCGCTCGTT TTCCCGAGAC GCGTTCCCGC CGGCCCTCCG TCTCGGCTCG
GGCTGCGGCG GGGAGGTGGC TGGGTCGGCT AAACTACGCT GCGTGAGCGA GAAGGGACAT
CTGTGGGGCG GGCGGTTCGG TTCGGGGCCG GCGGAGGCTT TCGAGCGCCT GAACGCCTCC
ATCCCCTTTG ACGTGCGGCT CGCGCCCTAC GACGTGCGCG GCTCCATCGC CCACGCCCGG
ATGCTCGGCG AGACGGGGAT AATCTCCCGC GAGGAGGCGG AGGCGCTCGT GGGCGGCCTG
GAGTCGGTGC TCGAGGAGGT GGAGGCCGGG GAGTTTTCGT GGAGCCTCGC CGACGAGGAC
GTGCACACCG CGGTCGAGCG CCGGCTGCGG GAGAAGGTGG GCGACGTGGC GCTCAAGCTG
CACACCGGGC GCAGCCGCAA CGACCAGGTC TCGCTCGACC TGCACCTCTT CTGCCGGGAC
GCCGCGGAGC GCATAGGGGA GGGGCTGCTC GAGGCAATGG CCGCCCTCGT GGAGGTGGCG
GAGAGGCACT CCGACCTCGT GCTCCCCGGC TACACGCACC TGCAGCGGGC GCAGCCCCTT
CTGCTCTCGC ACCACCTGCT CGCCCACTTC TGGGCCTTCG CGCGCGACCT CGGGCGTCTG
GACGCGGCGA GGGAGGCGGC CAACGTCTCC CCGCTCGGGG CCGCGGCGCT GGGGGGGACG
CCCCACCCGG TGGACCCGGC GCTCGTGGCC GCCGAGCTGG GGATGGAGCC GTTCGCCAAC
TCGCTAGACG CCGTCTCCGA GCGGGACTTC GCCCTCGACC TGCTCTACGC CTGCGCGGTG
CTCGGGGTGC ACCTCTCGCG GCTCGGGGAG GAGTGGGTGC TGTGGACCAG CCAGGAGTTC
GGGTTCGCCG AACTCGACGA CGCCTACTCC TCCGGCTCCT CCATCATGCC CCAGAAAAAG
AACCCCGACG CCTACGAGCT CATGCGCGGC CGGGCGGGGC GCCTCATCGG GGACCTGAGT
GCGCTCATGG TCACCCTGAA GGGCCTGCCG CTCGGCTACT CCAAGGATCT GCAGGAGGAC
AAGGAGCCCC TCTTCGACGC CGTGGACGGC GTGCTGGCGG TGCTCGCCGT GCTGCCGGGG
ATGCTGAGGA CGGCGCGCTT CTGCGGCGAG AGGATGGAGG GGGCCGCGGG CGGGTTCGCG
CTGGCCACCG AGCTCGCGGA CTTTCTGGCG GCGCGGGGCG TGCCCTTCCG GGAGGCCCAC
CGGGTGGTCG GGCGGCTCGT GCGGCGTTGC GAGGAGCTCG GGGTCTCGCT GGAGGAGGTG
CCGCGCGCGG AGCTCGCGGC GGCGCACCCG GCGCTCGGGG AGCTGCCGGA GGGCCTCCTC
AGACCGCGGG GGAGCGTTGC GAACAAGAGG AGCCCCGGCT CCACCTCGCC CGCCTCGGTC
GAGGAGCAGC TGCGGCGGGC GAGGGAGCTC CTGCTCGCCC GCCGCGGCGG GGCTCGGTCA
ACAGAGCACA GGGGGTGA
|
|---|
| Protein sequence | MNELRSFSRD AFPPALRLGS GCGGEVAGSA KLRCVSEKGH LWGGRFGSGP AEAFERLNAS
IPFDVRLAPY DVRGSIAHAR MLGETGIISR EEAEALVGGL ESVLEEVEAG EFSWSLADED
VHTAVERRLR EKVGDVALKL HTGRSRNDQV SLDLHLFCRD AAERIGEGLL EAMAALVEVA
ERHSDLVLPG YTHLQRAQPL LLSHHLLAHF WAFARDLGRL DAAREAANVS PLGAAALGGT
PHPVDPALVA AELGMEPFAN SLDAVSERDF ALDLLYACAV LGVHLSRLGE EWVLWTSQEF
GFAELDDAYS SGSSIMPQKK NPDAYELMRG RAGRLIGDLS ALMVTLKGLP LGYSKDLQED
KEPLFDAVDG VLAVLAVLPG MLRTARFCGE RMEGAAGGFA LATELADFLA ARGVPFREAH
RVVGRLVRRC EELGVSLEEV PRAELAAAHP ALGELPEGLL RPRGSVANKR SPGSTSPASV
EEQLRRAREL LLARRGGARS TEHRG
|
|---|
| |