| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0920 |
|---|
| Symbol | |
|---|
| ID | 4117112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 958379 |
|---|
| End bp | 959593 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638035705 |
|---|
| Product | pyruvate ferredoxin oxidoreductase, alpha subunit |
|---|
| Protein accession | YP_643699 |
|---|
| Protein GI | 108803762 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0105512 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATAG AGAAGCCGGT AGGGCGGCAG ACCGAGAAGC TGACCACCGG CACCCAGGCG
GTGGCCCAGG CGGTGAAGCT GGCCGACGTC GACGTGACGG CGGCCTACCC CATAAGGCCC
TACGACGGCG TCATGCAGGC GGTGGCCAAG CTCATCGCCG ACGGGGAGCT CGACTGCGAG
TTCATCGTCG CCGAGGGCGA GCACTCGCAG TTCGAGATCT GCAAGCACGC CTCCGCCGTG
GGCAGCCGGG TGTTCGTGGG CTCCTCGGGC GTGGGCTGGA TGTACGCGAT GGAGTCGCTG
TGCGTGACGC CTTCGCTGCG GCTGCCGGTG GTCGCCATGA TCGGCAACCG GGCGCTCGAC
GACCCGGGGG CCTTCGGGGT CGAGCACAAC GACGCGATGG CCGTGCGGGA TCTGGGCTGG
CTGCTCTTCT GGGTGGAGGA CGCCCAGGAG TGCTTCGACG CCACGCTCAT GGCCTACCGG
GTCGGCGAGG ACCCGCGGGT CTCGCTGCCG GTGGGGCTCG GGGTCGACGG GGCGTTCATC
ACCCACTCCC AGACGCTCAT CAAGATCCCC GACCAGGAGA CCGTGAACGA GTTCCTCCCG
CCCTACGACC TCGGGGACCG GCTGCTGCAC CCGGACAACC CCATCAGCAT CGCCCCCCAG
GCCAACGAGG ACTGGGTGAT GGAGATCCGC AAGCAGACCG ACGCGGCCGC CCGCAGGGTG
AAGGACGTGA TCCGGGAGGC CCACGCGGAC TTCCGGCGGC TGTTCGGGCG CGGGGGCGAC
AACCCCTTCT TCGAGGAGTA CATGACCGAG GACGCCGAGT ACGTGCTCTT CGGCATGGGC
TCGCTGGGGC TCCCGGCCAA GGTCATGGTC CGGCGCCTGC GGGAGAGGGG GGAGAAGGTC
GGGTTCGTGC GCCTGAAGTG GTTCAGGCCC TTCCCCGCCG AGGAGCTCGC CGAGTCGCTC
GGCCGCTTCC GGGCGGTCGG CGTGATCGAC CGGGACTACT CCTACGGCTC GCCGCAGCAG
GGCGGGGTGC TCTTCACCGA CCTCCGGGCC GCCCTCTACG ACGCCGAGCG GCGGCCGAGG
ATAGTGAACT TCATCGGCGG GCTCGGCGGC CGGGAGCTCA CCCCCGAGAT GATGGACGAG
ATGGCCGACC TCACCAAGCG GGCCGGGCGC GGGGAGGACG TGCCGGCCGT CAGCTGGATC
GGCGTGCGCG AGTGA
|
|---|
| Protein sequence | MTIEKPVGRQ TEKLTTGTQA VAQAVKLADV DVTAAYPIRP YDGVMQAVAK LIADGELDCE
FIVAEGEHSQ FEICKHASAV GSRVFVGSSG VGWMYAMESL CVTPSLRLPV VAMIGNRALD
DPGAFGVEHN DAMAVRDLGW LLFWVEDAQE CFDATLMAYR VGEDPRVSLP VGLGVDGAFI
THSQTLIKIP DQETVNEFLP PYDLGDRLLH PDNPISIAPQ ANEDWVMEIR KQTDAAARRV
KDVIREAHAD FRRLFGRGGD NPFFEEYMTE DAEYVLFGMG SLGLPAKVMV RRLRERGEKV
GFVRLKWFRP FPAEELAESL GRFRAVGVID RDYSYGSPQQ GGVLFTDLRA ALYDAERRPR
IVNFIGGLGG RELTPEMMDE MADLTKRAGR GEDVPAVSWI GVRE
|
|---|
| |