Gene Rxyl_0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0895 
Symbol 
ID4116718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp935775 
End bp936770 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content67% 
IMG OID638035679 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_643674 
Protein GI108803737 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0441838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCAAA ACGGGTATCT GTCGCAGGCG GCCGAGAAGC GCCTGATGCT GTTCTCCGGC 
GGGGGCTATC CGGAGCTGGC CGAGCGGATA GCCGACCGGC TGGACCTCGA GCTGGGGAGC 
GTGGAGCTTG TCCAGTTCTC CAACGGCGAG GTCTACGCCC GCTACCTGGA GAGCGTCCGG 
GGCTCGGACG TGTTCATCGT GCAGTCGCTG TGCGACCCGG TGAACAAGAA CCTCATGGAG 
CTTCTGGTGA TGGTGGACGC GGCCAAGCGG GCCTCCGCGG AGAGCATCGT GGCGGTCATC 
CCCTGGTACG CCTACTCCCG CCAGGACCGC AAGACCAAGC CGCGCGAGCC GATCACGGCC 
CGGCTGGTGG CCGAGATGCT GAAGGTCGCG GGGGCCGACA GGATCATGAC GATGGACCTG 
CACGTCGGGC AGATAGAGGG CTTCTTCAGC TTCCCGGTGG ACCACCTTAC GGCGATGCAC 
ACCTTCGTGG ACCACTTCGT GGACGAGGGC TTCCAGAACG CCCCGGACAC GGTGGTTGTG 
GCCCCGGACA CCGGCGAGGT GAAGATGGCC AAGCGCCTCG CCGACCACCT GGGGCTGCCG 
TGGGCCATCG TGAACAAGAT CCGGCGGGGC CCCGGCGAGT CGGAGGTGAC GCACGTGATC 
GGGGAGGTCT CCGGCCGGCG GGCCATCCTG ATCGACGACA TCATCGACGG CGGCGGGACG 
ATGGTCGGGG CGGCAGAGGC GCTCCTGAGC GAGGGGGCGA CGGAGGTCTA CGCGGCGGCG 
ACCCACGCGG TCTTCTCCGG GCGGGCCTAC GAGAGGATCG AGGAGTCCCC CATCCGGGAG 
GTGGTGGTGA CGGACACGCT GCCCTTGAAG CCCGGCAAGC CGCGTTCTAA GATACGCACG 
CTCACGATCG CGCCGATCCT TGCGAGCACG ATACGCAACG TCTTCACCGA CGACTCGGTG 
AGCGCGGTGT TCATGGGCGA GAACCAGCTC TTCTAG
 
Protein sequence
MRQNGYLSQA AEKRLMLFSG GGYPELAERI ADRLDLELGS VELVQFSNGE VYARYLESVR 
GSDVFIVQSL CDPVNKNLME LLVMVDAAKR ASAESIVAVI PWYAYSRQDR KTKPREPITA 
RLVAEMLKVA GADRIMTMDL HVGQIEGFFS FPVDHLTAMH TFVDHFVDEG FQNAPDTVVV 
APDTGEVKMA KRLADHLGLP WAIVNKIRRG PGESEVTHVI GEVSGRRAIL IDDIIDGGGT 
MVGAAEALLS EGATEVYAAA THAVFSGRAY ERIEESPIRE VVVTDTLPLK PGKPRSKIRT 
LTIAPILAST IRNVFTDDSV SAVFMGENQL F