Gene Rxyl_0876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0876 
Symbol 
ID4116971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp917573 
End bp918610 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content69% 
IMG OID638035659 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein 
Protein accessionYP_643655 
Protein GI108803718 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTCCG GCGGCAACCT GCTGGAGGTC CGCAACCTCA AGATGCACTT CCCCATCCGG 
GCCGGGGTGC TCAAGCGGAC CGTCGGGCAC GTGAAGGCCG TGGACGGGGT GGACCTCGCG 
GTGCGGCCCG GGGAGACGCT GGGGCTGGTG GGCGAGTCGG GCTGCGGCAA GAGCACCCTC 
GCCCGCTGCA TCCTGCGGCT GCTGGAGCCC ACCGGGGGCG AGGTGATCTT CGAGGGGCGC 
AACATCCTCG AGCTCTCCCG CAAGGAGATG CTGCGGGTCC GGCGGGACAT GCAGATCATC 
TTCCAGGACC CCTACGCCTC GCTGAACCCC CGCATGACGG TCGGCAACAT CATCGCCGAG 
CCGCTGAAGA CCCACCGCGT GGAGGGGGAT ATAAAGCGGC AGGTGCAGGA GCTTCTGGAG 
ATAGTGGGCC TCTCTCCCGA GCACTACAAC CGCTACCCGC ACGAGTTCTC CGGCGGCCAG 
CGGCAGCGGA TCGGGGTGGC CCGGGCCCTC GCCCTGAAGC CGAAGCTGGT GATCTGCGAC 
GAGCCGGTCT CCGCTCTGGA CGTCTCCATC CAGGCGCAGA TAGTGAACCT CCTGCAGGAT 
CTGCAGAGGG AGTTCGGGCT CACCTACATC TTCATCGCCC ACGACCTCTC GGTCGTGAAG 
CACATCTCCG ACCGGGTGGC GGTCATGTAC CTGGGGCGGG TGGTGGAGAT CGCCGACCGC 
AAGACCCTCT ACGAGAGGCC GCGCCACCCC TACACCACGG CGCTGCTCTC GGCGATCCCC 
ATCCCCGACC CGGAGAAGGA GCGCGAGCGC CAGCGCATAG TGCTGGAGGG GGACGTGCCC 
TCCCCGGCCA ACCCGCCCCC GGGCTGCACC TTCCACACCC GCTGCCCGCG GGCCCAGCCC 
TACTGCTCGG AGCACGTCCC GACCCTGGAG ACCCAGGTGG AGAACGGCCA CCGCACCGCC 
TGCTTTTTCC CGGTGATGGA GGGCCAGCCC ATCGAGCGGC CCGCCGCGAG CACCCCCTAC 
CGGGCGGACG GGGCGTAG
 
Protein sequence
MTSGGNLLEV RNLKMHFPIR AGVLKRTVGH VKAVDGVDLA VRPGETLGLV GESGCGKSTL 
ARCILRLLEP TGGEVIFEGR NILELSRKEM LRVRRDMQII FQDPYASLNP RMTVGNIIAE 
PLKTHRVEGD IKRQVQELLE IVGLSPEHYN RYPHEFSGGQ RQRIGVARAL ALKPKLVICD 
EPVSALDVSI QAQIVNLLQD LQREFGLTYI FIAHDLSVVK HISDRVAVMY LGRVVEIADR 
KTLYERPRHP YTTALLSAIP IPDPEKERER QRIVLEGDVP SPANPPPGCT FHTRCPRAQP 
YCSEHVPTLE TQVENGHRTA CFFPVMEGQP IERPAASTPY RADGA