Gene Rxyl_0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0875 
Symbol 
ID4116970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp916557 
End bp917576 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content68% 
IMG OID638035658 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein 
Protein accessionYP_643654 
Protein GI108803717 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATGC TGGAGGTGAA CAACCTGAAG ACCTACTTCC ACACCGCCGA CGGCGTGGTG 
AAGGCGGTGG ACGGGGTCTC CTTCGCGCTG GAGCCGGGGG AGACCCTGGG GATAGTGGGC 
GAGTCGGGCA GCGGCAAGAG CGTTACCGCG CTCTCGGTGA TGCAGCTCAA CCCGCAGCCC 
CCCTGCGAGT ACCCGGAGGG CGAGATCCTC TTCGAGGGCA GAGACCTGCT CGGGGCCTCC 
GAGAAGGAGA TGCAGAAGAT CCGGGGCAAC GACATCGCGA TGATCTTCCA GGACCCGATG 
ACCTCGCTCA ACCCGGTCTT CACCGTGGGC GACCAGATAG CCGAGGCCAT CCGCATCCAC 
CAGAAGGTCT CCAAAAAGGA GGCCCGGGAG CGGACCGTGC AGGTGCTGCG GGACGTGGGG 
ATCGCCAACC CCGAGCAGCG CGCCCGCGAG TACCCGCACC AGTTCTCCGG CGGCATGCGC 
CAGCGGGCCA TGATCGCCAT GGGGCTCGCC TGCAACCCCA AGGTGCTCAT CGCCGACGAG 
CCCACCACCG CGCTCGACGT GACCATCCAG GCCCAGATCC TGGAGCTCAT GGTCGACCTG 
CAGGAGAAGT ACGGGACGGC GATCATCATG ATCACCCACG ACCTCGGGGT GGTCGCCCAG 
ATGGCCGACA AGGTGATGGT GATGTACGCC GGGCGCTCGG TGGAGCAGGG GCCGACCGAC 
CCCATCTTCT ACGACCCGCT GATGCCCTAC ACCTGGGCGC TCCTGCGCTC CATCCCCCGC 
CTGGACACCG CCGGGGAGGT GCGGCTGCTG CCCATAAAGG GCCAGCCGCC GAGCCTGATC 
TTCCTGCCCG AGGGCTGCAA CTTCAGCCCG CGCTGCCCGT TCGTCAGGGA CGAGTGCCGC 
AGCACCGACC CGGCGCTCGA GGAGAAGCGG CCGGGGCACT CGGCCGCCTG CATCCTCTCC 
GTGCAGGAGG TCGAGGAGAA GAAGCACCTG GTCGACGAGG AGCTGGGGGT GGAGCGATGA
 
Protein sequence
MAMLEVNNLK TYFHTADGVV KAVDGVSFAL EPGETLGIVG ESGSGKSVTA LSVMQLNPQP 
PCEYPEGEIL FEGRDLLGAS EKEMQKIRGN DIAMIFQDPM TSLNPVFTVG DQIAEAIRIH 
QKVSKKEARE RTVQVLRDVG IANPEQRARE YPHQFSGGMR QRAMIAMGLA CNPKVLIADE 
PTTALDVTIQ AQILELMVDL QEKYGTAIIM ITHDLGVVAQ MADKVMVMYA GRSVEQGPTD 
PIFYDPLMPY TWALLRSIPR LDTAGEVRLL PIKGQPPSLI FLPEGCNFSP RCPFVRDECR 
STDPALEEKR PGHSAACILS VQEVEEKKHL VDEELGVER