Gene Rxyl_0870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0870 
Symbol 
ID4117200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp910892 
End bp911860 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content70% 
IMG OID638035653 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein 
Protein accessionYP_643649 
Protein GI108803712 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.772702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCGC CGGCGAACGG CGCCCTCGTG GAGATCCGCG ACCTCAAGAA ATACTTCAAG 
GTGGGGCGCG ACGCCTACCT GCGGGCGGTC GACGGGATCA ACCTCACCAT CCGCCGCGGG 
GAGACGCTGG GGCTGGTGGG CGAGTCGGGC TGCGGGAAGT CCACCGCCGG GCGGGTCATG 
GTCCGCCTCT ACGAGCCCAC CGGCGGGCAG GTGCTCTACG GCGGGCGGGA CGTCCACCGG 
GCCCGGGGCC GCGAGGCGCG GGAGCTGAAC CGCAAGATGC AGATGATCTT CCAGGACCCG 
CAGGCCTCGT TGAACCCCCG CATGACGGTG GCGGACATCG TGGCCGAGGG GATAGACATC 
CACGGCCTGG CCTCCAGCAA GAAGGAGCGG CTGGAGAAGG TCCGCGAGCT GCTGGAGACG 
GTGGGGCTCA ACGAGGAGCA CGCCGGGCGC TACCCGCACG AGTTCTCCGG CGGCCAGCGG 
CAGCGGATCG GGATAGCGAG GGCGCTGGCG GTGGAGCCGG AGTTCATCGT GGCCGACGAG 
CCGGTCTCCG CTCTGGACGT CTCCATCCAG GCCCAGGTCA TAAACCTGAT GCGCCGCCTG 
CAGCGGGAGA AGAACCTGAC CTACCTGTTC ATCTCCCACG ACCTCTCGGT GGTCCGCTAC 
ATCAGCGACA GGATCGGGGT GATGTACCTG GGCCAGCTGG TGGAGCTCGC CGACAGCGAG 
GAGATCTACT CGAACCCCGT CCACCCCTAC ACGCAGGCCC TGCTCTCCGC GGTGCCCGTC 
CCGGACCCGG ATCACCGGGG CAGGAAGATC GTGCTGGAGG GGGATATCCC GAGCCCCGTG 
GACCCGCCCT CCGGCTGCCG CTTCCGGACC CGCTGCCCGT ACGCCACGGC CGCCTGCGCC 
ACGGACGAGC CGCAGTGGCG CGAGGTCTCC CCGGGACACT GGGTCTACGC CTGCCACTGC 
GTGTCATGA
 
Protein sequence
MSAPANGALV EIRDLKKYFK VGRDAYLRAV DGINLTIRRG ETLGLVGESG CGKSTAGRVM 
VRLYEPTGGQ VLYGGRDVHR ARGREARELN RKMQMIFQDP QASLNPRMTV ADIVAEGIDI 
HGLASSKKER LEKVRELLET VGLNEEHAGR YPHEFSGGQR QRIGIARALA VEPEFIVADE 
PVSALDVSIQ AQVINLMRRL QREKNLTYLF ISHDLSVVRY ISDRIGVMYL GQLVELADSE 
EIYSNPVHPY TQALLSAVPV PDPDHRGRKI VLEGDIPSPV DPPSGCRFRT RCPYATAACA 
TDEPQWREVS PGHWVYACHC VS