Gene Rxyl_0863 details

Gene Information

• Locus tag: Rxyl_0863
• ID: 4117193
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: +
• Start bp: 903757
• End bp: 904365
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638035646
• Product: ECF subfamily RNA polymerase sigma-24 factor
• Protein accession: YP_643642
• Protein GI: 108803705
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.523408
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATGGACT ACGCATCCAC CGCGACACTC GGCGGCTGGC GGGAGAGGAT CAAGGGCCTC 
TCCCTCCGGC GCGGGGAGCT CGAGGACAAG GAGCTCGTCG CCCGCACGCT CGCCGGCGAC 
ATGCGCTCCT ACGAGGAGCT TGTGCGCCGC TACGAGCGGC TCGTGGCGAG CCTGCTCTAC 
CCCTACGCCC GGCGGGAGAT CTCGGTGGAA GACCTCGTGC AGGAGACCTT CCTGCGGGCC 
TACGACCGGC TGGAGACCTT CAACCCCGAG TACCGGTTCA AGACCTGGCT GCTCGCGATA 
GCCAACAACC TCGGCGTGGA CACCCTGCGC CGGCGGCGCG AGGTCGTGGA GTTCAACCAC 
GAGGTGCACG CCGGGGAGAC GGGCGGGCCA GAGGCCGCCG CCCTCTCCGC CGAGCGGGCG 
GAGAGCCTCC GGGAGGCGGT GCTCTCGCTC CCCGAGCAGT ACAGCGTCCC CCTCATGCTG 
CGCTACGGCG AGGAGATGAG CTACGCCGAG ATAGCCGAGG TCATGGGGCT CAGCGTCCCC 
GCGGTGAAGA GCCGCCTCTT CAGGGCCAGG AACATGCTCG CCGGCCTGCT GGAGGGAGAG 
CTGGGATGA 

 

Protein sequence

MMDYASTATL GGWRERIKGL SLRRGELEDK ELVARTLAGD MRSYEELVRR YERLVASLLY 
PYARREISVE DLVQETFLRA YDRLETFNPE YRFKTWLLAI ANNLGVDTLR RRREVVEFNH 
EVHAGETGGP EAAALSAERA ESLREAVLSL PEQYSVPLML RYGEEMSYAE IAEVMGLSVP 
AVKSRLFRAR NMLAGLLEGE LG