Gene Rxyl_0858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0858 
Symbol 
ID4117188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp897892 
End bp898536 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content65% 
IMG OID638035641 
Productpeptidase, membrane zinc metallopeptidase, putative 
Protein accessionYP_643637 
Protein GI108803700 
COG category[R] General function prediction only 
COG ID[COG2738] Predicted Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.401397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATCG GGGCGCTCAT CTCCGGAGCG GCGGCGCTGT GGGTCAGAAG CTCCTACGCC 
GCATGGTCCA AGCGCCCGAG CTCGAGCGGG CTCACCGGAG CCGAGGTTGC CCGCATGATC 
CTCGAGCGCA ACGGGCTTGG CCACGTGAGG GTGGAGCCCG TGCCCGGCAC CCTCACCGAC 
CACTACGATC CCAGGGCCAA GGCGGTGAGG CTCTCTGAGG GCAACTTCAG GGGCAGCTCC 
ATTGCTGCGG TGAGCGTTGC CGCGCACGAG TGCGGGCACG CCCTGCAGGA CGCTGGGGGC 
TACCTGCCCA TGCGGCTTAG GGCCGGGATC TTTCCTGTGG TGATGTTCAG CAGCCAGGTG 
TGGCCGATGG CGTTTGTGCT GGGGGTCATA GGGCTAGGGC AGTTCTGGAT ACAGCTTGCT 
GTGGTTCTGT TTTTGGCGGT GCTGGCCTTC CATGTGGTGA CGTTGCCTGT GGAGATAGAC 
GCCTCGAGGC GGGCCTATGG GATCCTTGGT CGCTATGGGG TGATCTCCTC TGGAGAGGCT 
GGAGGGAGCA GGCGGGTGCT CACTGCTGCG GCCTTCACCT ACATAGCCGC TGCCCTCACC 
GCCGTGCTGA TGTTCCTGTA CCTGCTGATG GCCAGCCGCG AGTAG
 
Protein sequence
MIIGALISGA AALWVRSSYA AWSKRPSSSG LTGAEVARMI LERNGLGHVR VEPVPGTLTD 
HYDPRAKAVR LSEGNFRGSS IAAVSVAAHE CGHALQDAGG YLPMRLRAGI FPVVMFSSQV 
WPMAFVLGVI GLGQFWIQLA VVLFLAVLAF HVVTLPVEID ASRRAYGILG RYGVISSGEA 
GGSRRVLTAA AFTYIAAALT AVLMFLYLLM ASRE