| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0857 |
|---|
| Symbol | |
|---|
| ID | 4117187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 897445 |
|---|
| End bp | 897726 |
|---|
| Gene Length | 282 bp |
|---|
| Protein Length | 93 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638035640 |
|---|
| Product | peptidoglycan-binding LysM |
|---|
| Protein accession | YP_643636 |
|---|
| Protein GI | 108803699 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1388] FOG: LysM repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.555346 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGA GGAAGAGGGT CGAGCGCCGC TACCGCAGAA GGAGGCTCGT GGCCCTGCTC
GCCGTGGTGG CCTGCGCCCT GGGCCTCGCG GCGAACGCGC GGGCGGAGCC CGAGACGGAG
CGCTACACGG TGAGGCCCGG GGACACCCTG TGGTCCATAG CCACGGAGCG CTACCCGCCG
CACGCCGACC CCCGCGCGGT GATCGAGGAG ATCCGGCGCC AGAACGGGCT GCCGGGCTAC
GGGATCCGGC CCGGAGAAGT CCTGAGCCTC CCGGAAGGCT AG
|
|---|
| Protein sequence | MSERKRVERR YRRRRLVALL AVVACALGLA ANARAEPETE RYTVRPGDTL WSIATERYPP
HADPRAVIEE IRRQNGLPGY GIRPGEVLSL PEG
|
|---|
| |