Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0837 |
Symbol | |
ID | 4117128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 874790 |
End bp | 876373 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638035621 |
Product | D-3-phosphoglycerate dehydrogenase |
Protein accession | YP_643617 |
Protein GI | 108803680 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.746889 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGGGTGC TCGTAACCGA GAAGCTCGCC GAGCGCGGCG TAGAGCTCCT GCGGAGGGAG TTCGAGGTCG ACGTGCTCCT CGGCCTCTCG CCCGGCGAGC TGCTGGAGAG GATCGGGGAG TACGACGGGC TGATCGTCCG GAGCGCCACC AAGGTGACTG CGGAGGTCAT AGAGGCCGCC GGGAGGCTCA AGGCCATCGG GCGCGCGGGG ATCGGGGTGG ACAACATAGA CATCGAGGCG GCCACCAAGC GGGGCATCCT GGTGGCCAAC GCCCCGGAGA GCAACACGGT GGCCGCCGCC GAGCACACCC TGGGGCTGAT GCTCGCCGTC GCCCGGCGCA TCCCGGCCGC CGACGCCTCC CTGCGGCGCG GGGAGTGGAA CCGCGCCGCC TTCAAGGGCG TGGAGGTCGC CGAGAAGACG CTCGGCCTGG TCGGCCTGGG GCACGTGGGC TCCATCGTCG CCCGCGGCGC CCTGGGGATG GGGATGCGCG TCCTCGCCTA CGACCCCTAC GTCTCCGAGG AGAGGATGCG CTCGATGAAC GTGGAGCGGG CGGGCTCGCT GGAGGAGATC TTCGAGGAGG CCGACTTCGT CTCGCTGCAC GTCCCCCGCA CTCCCCAGAC CACGGGCATG GTGGGCGAGG AGGAGCTGGC GCGGATGAAG CCCACCGCCT ACCTGATAAA CGTGGCCCGC GGCGGGATAG TGGACGAGAC CGCCCTCTAC AACGCCCTCA AGCAGGGCGA GATAGCGGGG GCCGCGCTCG ACGTCTTCGC GGAGGAGCCG ACCACCGACT CCCCCCTCTT CGCCCTCCCG AACGTGGTCG TCACCCCCCA CCTGGGGGCG AGCACCGCCG AGGCCCAGGA CCGGGCGGGC GTGACGGCGG CCGAGCAGGT GGCGGCGGCC CTCAGGGGAG AGGTGCCGAT ACACGCTATA AACGCCCCGG TGCCCGCGGG GGAGGGGGCG GAGTTCGTCT CCCAGTTCGC CGGGCTCTGC GAGACGCTGG GGAGGCTGCT CTACCAGCTC ACGGACCGGC CCGGCAGCCG CCTCAAGATA GAGTACCGCG GCGAGATCGG GGCCTACGAC ACCCGGCTGC TGGACGTCTC GGTGCAGAAG GGGCTCCTGT CCCGGATGGT GCACGAGCCC CTGAACTACG TTAACACCCC CATCCTGGCG AAGGAGCGGG GGCTGAAGGT CGAGACCTCG AAGACCTCGG AGAGCTCGGA CTACACCAAC CTGGTGGTGG TCCGCATCGA GAGCAACGGC GGCGAGAGCG TGGTGAGCGG CACCCTCACC GGCCCCCGGA TGCAGCCCCG GCTGGTCGAG GCCCTCGGCT ACACGCTGGA TATCGTCCCG GAGCGGCACA TGCTGTTTAT CCGCAACGAG GACGTGCCGG GCATGATCGG GAAGGTCGGC ACGATCCTCG GCGAGCACGG GATAAACATC GGCAACATGG CCGTGGGGCG CGGCGAGCCG GGAAGCCGGG CGGCGATGGC GGTGACCGTG GACGAGCCGG TGCCCCCGGA GGTCGTCGAG AGCCTCCTGA ATATCCCGGG CTTCAACGAC GCCCGGGCCG TCACCCTCTA CTAA
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Protein sequence | MRVLVTEKLA ERGVELLRRE FEVDVLLGLS PGELLERIGE YDGLIVRSAT KVTAEVIEAA GRLKAIGRAG IGVDNIDIEA ATKRGILVAN APESNTVAAA EHTLGLMLAV ARRIPAADAS LRRGEWNRAA FKGVEVAEKT LGLVGLGHVG SIVARGALGM GMRVLAYDPY VSEERMRSMN VERAGSLEEI FEEADFVSLH VPRTPQTTGM VGEEELARMK PTAYLINVAR GGIVDETALY NALKQGEIAG AALDVFAEEP TTDSPLFALP NVVVTPHLGA STAEAQDRAG VTAAEQVAAA LRGEVPIHAI NAPVPAGEGA EFVSQFAGLC ETLGRLLYQL TDRPGSRLKI EYRGEIGAYD TRLLDVSVQK GLLSRMVHEP LNYVNTPILA KERGLKVETS KTSESSDYTN LVVVRIESNG GESVVSGTLT GPRMQPRLVE ALGYTLDIVP ERHMLFIRNE DVPGMIGKVG TILGEHGINI GNMAVGRGEP GSRAAMAVTV DEPVPPEVVE SLLNIPGFND ARAVTLY
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