| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0834 |
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| Symbol | gatB |
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| ID | 4117086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 870749 |
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| End bp | 872254 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638035618 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_643614 |
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| Protein GI | 108803677 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.211661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCACC GGCACGGGTT CCCCGAGAAG CGCGAGGTGC ATGGCGGCTT GGAGCTAAAG
GACAGGAAAG CTTACCAGGC GGTGATCGGG CTGGAGTTCC ACGTCCACCT CTCCACCCGC
ACCAAGATGT TCTGCGGCTG CCGGGTGACC TACGGCGAGC CGCCCAACAC CCACGTCTGC
CCGGTCTGCC TGGGGCACCC GGGCGCGCTG CCCGTGGCCA ACGAGCGGGC CGTGGAGCTC
GGGGTGATGG CCGGGCTCGC GCTCAACTGC CGGGTCGCCG GGCGGGCCGT CTTCGCCCGC
AAGAACTACT TCTACCCCGA CCTGCCGAAG GGCTACCAGA TCTCCCAGTA CGAGGAGCCC
ATCTGCACCG GCGGGCACAT AGACGTGCCC ACCTCCGAGG GCACGGTGCG GGTCAGGATC
CGGCGGCTGC ACCTGGAGGA GGACACGGCC AAGAACGTCC ACGTGGGCGA GTCGGGCCGG
ATGCACGGCT CGGTGGGCTC GCTCATAGAC TTCAACCGCA GCGGGGTGCC GCTCATGGAG
ATCGTCACCG AGCCAGACAT CCCCTCCCCC GAGGCGGCCC GGCAGACCGC CGTGCGGCTG
CGGGAGATCC TGCAGGCAGT AGGGGCCTCG GAGGCGGACA TGGAGAAGGG CCAGATGCGC
TGCGAGGCCA ACGTCTCGCT GCGCAACCCG GACGGCACGC CCGGCACCCG CACGGAGCTC
AAGAACATCA ACTCGTTCCG CTTTATGGAG CGGGGGCTGG TGCGGGAGCT GCGGCGCCAG
CGGGAGGTGC TGGAGTCCGG CGGCCGGGTG GAGCAGGCCA CCATCCACTA CGACCCGGTC
GCCGACGAGG TGCACGAGCT GAGGAGCAAG GAGTTCGCCG AGGACTACCG CTACTTCCCG
GAGCCGGACC TGCTGCCGCT GCAGCTCTCC CCGGCCTGGG TGGAGGAGCT CCGCCGGCGC
CTTCCGGAGC TCCCGGAGCA GACCCGCCGC CGCTTCGTCG AGCAGTACGG CCTCTCGGAG
GCCGACGCCG CGGTGCTCGC CGCCGAGAGG GAGCTTGCCG CCTTCTACGA GAGGGTGGCC
TCGGAGGCGG ACCCCCGGCA GGCGGCCAAC TGGATCTCCG GCGACCTCCG GGCGCTGCTG
AACGAGGCGC AGGTCGGCAT CTCCGGCTCG AAGGTCCGCC CGGAGCACCT GGTGGAGCTG
ATACGGCTCG TCCAGGAGGG CACCATCTCC CGCTCCGCCG CCAAGACGGT GCTCGGCCGC
GTCTTCGAGA GCGGCGAGCG CCCCTCGCGC GTCGTCGAGC GCGAGGGGCT CGCCCAGATG
GGGGCCGACG AGCTCGGCGG GATAGTGGAC GAGGTGATCT CCTCGAACCC CGAGGAGGCC
GAGCGGGTGA GGAACGGCGA CCAGAAGGTG GTGGGCTTCC TGATCGGCCA GGTGATGCGG
GCCACCCGGG GCCAGGCCGA CGGCGGCCGG GTGCGCCAGC TGATCCTGGA GCGGCTCGGC
TCCTAG
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| Protein sequence | MSHRHGFPEK REVHGGLELK DRKAYQAVIG LEFHVHLSTR TKMFCGCRVT YGEPPNTHVC
PVCLGHPGAL PVANERAVEL GVMAGLALNC RVAGRAVFAR KNYFYPDLPK GYQISQYEEP
ICTGGHIDVP TSEGTVRVRI RRLHLEEDTA KNVHVGESGR MHGSVGSLID FNRSGVPLME
IVTEPDIPSP EAARQTAVRL REILQAVGAS EADMEKGQMR CEANVSLRNP DGTPGTRTEL
KNINSFRFME RGLVRELRRQ REVLESGGRV EQATIHYDPV ADEVHELRSK EFAEDYRYFP
EPDLLPLQLS PAWVEELRRR LPELPEQTRR RFVEQYGLSE ADAAVLAAER ELAAFYERVA
SEADPRQAAN WISGDLRALL NEAQVGISGS KVRPEHLVEL IRLVQEGTIS RSAAKTVLGR
VFESGERPSR VVEREGLAQM GADELGGIVD EVISSNPEEA ERVRNGDQKV VGFLIGQVMR
ATRGQADGGR VRQLILERLG S
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