| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0831 |
|---|
| Symbol | |
|---|
| ID | 4117083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 866802 |
|---|
| End bp | 867782 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638035615 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_643611 |
|---|
| Protein GI | 108803674 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0569804 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATGC GGGACGTGGC CCGGCGGGCG GGGGTTTCGC CGGCGACGGT ATCGCGGGTG
CTCAACGGGG TACCGACGGT GGGGGAGGAG CACCGCCGGC GGGTGCTGCG GGCGATCGAG
GAGCTCGGGT ACAGGCCGAA CCGGCTGGCG AGCAACCTGC GGCGCCAGAA GGCCGAGATG
ATCGGGGTGG TCGTCTCGGA CATCGAGAAC CCGCACTTCA CCGGGATGGT GCGGGCGGTG
GAGGATGCGG CCTACCGGAA GGGGTACAGG GTTCTGCTGT GCAACACCGA CGAGACGCCG
CAGAAGCAGC GTTCCTACCT GGAGGTGCTG GCGGCCGAGC GGGTGCTGGG GGTCATCCTC
TCCCCCTCGG ACCCGGAGGA CGAGGAGATA GGCGAGCTTC TGGACCTCGG GATCCCGGTG
GTGGCCTTCG ACCGGACGGT GGCCGACCCG CGGGCGGACG CGGTGGTGGT GGACAACGTC
GGCGGGGTGC GCGCGGCGAC GCGCCGGCTC GTGGCGGCCG GGCACGAGCG GATAGGCTTC
GTCGGCGGCT CGGAGGGGAT AGAGACGGGG AGCGGGCGGC TGGCCGGCTA CCGGGAGGCG
ATGCTGGAGG CGGGGTTGGA GCCGCGCGTG GCCCACGGGG GCTTCAGGAT AGAGGGGGGG
TGGGAGGCCA CGCGGCGGCT GCTGTCCGAG GGGCTCACCG CGCTCGTCGT GGGCAACAAC
CTCATGACCA TCGGGGCGCT CAGGGCGCTG CGCGAGATGG GGTTGAGGGT GCCCCGGGAC
CTCGCGCTCG TCGCCGTCGA CGACCCGTTC TGGGCCGAGC TCGTCGAGCC GCCGCTCACC
ACGCTGGCGC AGCCGGTGCG CGAGATGGCC GGTTGCGCCA TGCGGATGAT GCTGGAGAGG
ATCTCGGGCG AGCGGAGCGA GCCCCGCAGG GAGGTCTTCG AGTTCGAGCT GAGGGTCCGC
GGCTCCTGCG GGACCGCGTA G
|
|---|
| Protein sequence | MKMRDVARRA GVSPATVSRV LNGVPTVGEE HRRRVLRAIE ELGYRPNRLA SNLRRQKAEM
IGVVVSDIEN PHFTGMVRAV EDAAYRKGYR VLLCNTDETP QKQRSYLEVL AAERVLGVIL
SPSDPEDEEI GELLDLGIPV VAFDRTVADP RADAVVVDNV GGVRAATRRL VAAGHERIGF
VGGSEGIETG SGRLAGYREA MLEAGLEPRV AHGGFRIEGG WEATRRLLSE GLTALVVGNN
LMTIGALRAL REMGLRVPRD LALVAVDDPF WAELVEPPLT TLAQPVREMA GCAMRMMLER
ISGERSEPRR EVFEFELRVR GSCGTA
|
|---|
| |