Gene Rxyl_0812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0812 
Symbol 
ID4116188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp844809 
End bp845798 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content75% 
IMG OID638035596 
ProductO-sialoglycoprotein endopeptidase 
Protein accessionYP_643592 
Protein GI108803655 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.423303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTGG CCATAGAGAC CTCCTGCGAC GACACCTGCG CGGCGGTGGT GGAGCCGGAC 
GGCCGCCGCG CCCTCTCCAA CGCCGTCCAC ACCCAGACCG AGCACGCCCG CTACGGCGGC 
GTGGTGCCAG AGGTCGCCTC CCGGGCGCAC CTCGAGCGCA TGGACGGCGT CGTCCGCAAG 
GCGCTCTCCG ACGCCGGCGT CTCGCTGGAC CAGATAGACC GGGTGGCGGT AACCGTCCGG 
CCCGGCCTGA TCGGGGCGCT CCTCGTGGGG GTGGCCGCGG CCAAGGGGGT CGCCTACGCC 
CGGCGGCTGC CGCTCGTCCC GGTGAACCAC CTGGAGGGGC ACGTGGCCGC CGCCTACCTG 
GAGGCCCCCG ACCTCGAGCC GCCCTTCGTG GCCCTGGTCG CCTCCGGGGG GCACACGGCC 
CTGTACGCGG TGGGCGAGGA CCGCGGGATG CGCCTGCTCG GGGAGACCCT CGACGACGCC 
GCGGGCGAGG CCCTGGACAA GGGGGCGAGG ATGCTGGGGC TGGGCTTTCC GGGCGGCCCC 
GCCATCTCCA GGGCTGCCGC GGGCGGGGAC CCGGAGCGCT ACGGCTTCCC CGTGGCCCTC 
AAGGGGAGGG ACAACCTGGA CTTCTCCTTC TCCGGCCTGA AGACCAGCCT CCTCTACAGG 
ATCCGGGAGC TCGGCCCCGA GCGGGTGCGG CGAGAGCTCC CGCACCTCGC GGCGAGCTAC 
GAGGCCGCCG TGGTGGAGGC GCTCGCCCGC AAGCTGCTGC GCGCCGCCGA GCTCCGGGAG 
GCCGGGGCCG TCGTGGTGGC CGGCGGGGTG GCGGCCAACG GGCGGCTGCG CGAGAGGCTC 
CGGCGCGAGT GCGCCGGGCG GGGGCTCAGG CTCGTGATCC CGCACCCCAG CCTCTGCACG 
GACAACGCCG CCATGATCGG GGCGGCCGCC GCCCACACCC CGAAGATCCC CTGGCCGGAG 
TACCTCTCGC TCAACGCCCG CAGCGTCTGA
 
Protein sequence
MILAIETSCD DTCAAVVEPD GRRALSNAVH TQTEHARYGG VVPEVASRAH LERMDGVVRK 
ALSDAGVSLD QIDRVAVTVR PGLIGALLVG VAAAKGVAYA RRLPLVPVNH LEGHVAAAYL 
EAPDLEPPFV ALVASGGHTA LYAVGEDRGM RLLGETLDDA AGEALDKGAR MLGLGFPGGP 
AISRAAAGGD PERYGFPVAL KGRDNLDFSF SGLKTSLLYR IRELGPERVR RELPHLAASY 
EAAVVEALAR KLLRAAELRE AGAVVVAGGV AANGRLRERL RRECAGRGLR LVIPHPSLCT 
DNAAMIGAAA AHTPKIPWPE YLSLNARSV