| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0757 |
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| Symbol | |
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| ID | 4116893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 788000 |
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| End bp | 789577 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638035541 |
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| Product | choline/carnitine/betaine transport |
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| Protein accession | YP_643537 |
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| Protein GI | 108803600 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.26622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGGAA AACTCAGAGC TTCCTCGGTG GACCCCGGGG TTTTCTATGT ATCGGTTGCG
GTGGCGGCGG CCTTCGTGGT GTGGGGGGTC TTCTTCACGG AGAGCCTTTC GGCTGCGGCC
TCGGCGGCGC TGGGCTACGT GATCTCCAAC TTCGGTTGGG TGTTCGTGCT CTCCACGTTC
GGGTTTCTGG TCTTTGTGCT GTTTCTGGCG TTCTCCCGCT ACGGCCGGAT AAGGCTCGGT
CGGGAGGGCG AGGAGCCCGA GTTCAGCACG CCCTCCTGGG TTGCGATGAT GTTCAGCGTG
GGGATGGGCA TCGGGCTGAT GTTCTACGGG GTTGCCGAGC CCATCTCGCA CCTTACGGCG
CCGCCGCACG GGCTTGCGGA GCCGGGCAGC GAGGAGGCGG CCCGGCTGGC GATGCAGTAC
TCCTACTTCC ACTGGGCGCT GCACCCCTGG GCGATATACG CGGTGGTGGG GCTCTCGCTG
GCGTACTTCG TCTTCCGCAA GGGGAGGAGC AACCTGATCT CCACGGCGTT CTACCCGCTG
CTCGGGGACC GGGTCGAGGG GGTGCCCGGC AAGGCGATCG ACGTTCTGGC CATCTTCGCC
ACGCTGTTCG GGACGGCCAC CTCGCTGGGG CTCGGCGCCC TGCAGATCAA CGGGGGGCTG
AGCTACCTGT GGGGCGTCCC CACGGGCACC GGGGTGGCCA TCGCGATCAT CGCGGTCCTC
ACGGTGGCCT TCGTGGTCTC GGCGGTGACC GGGGTGCACA ACGGCATCCA GTGGCTCTCC
AACACGAACA TGGTGCTCGC CGCGCTCCTG CTGCTGTTCG TGCTGGTGGT GGGGCCCACG
GTGTTCATCC TGAACACGTT CACCGAGTCC ATCGGCGACT ACTTCAGCCG GCTGGTGCCG
ATGAGCTTCC AGACGGCGGC CTTCGGGGAC GCCGACTGGC TGGCGGGCTG GACCATCTTC
TACTGGGCCT GGTGGATCTC CTGGACCCCG TTCGTAGGGA CGTTCATCGC CAGGATCTCG
CGCGGCCGGA CGATCCGGGA GTTCGTCCTG GGGGTGCTGG TGGTGCCGAG CCTGGTGACC
TTCGTCTGGT TCGCCGTGCT GGGCGGGACG GCGCTGGACC TGCAGCTGGA CGGCGGCGCG
GATATCGCCG GGGCCGTCTC CGAGAGCCCC GCCGCCGCCC TCTTCGCCAC CCTGGAGCAG
TTCCCGCTCT CGGTGCCGAT GTCGCTGCTG GCGGTGTTCC TCGTGGGGCT GTTCTTCGTG
AGCGGGGCCG ACGCCGGGGC GGTGGTGATG GGGATGCTCT CCTCGCGCGG CGTCCTGGAG
CCTAACCGCG CCCTCGTCGC CCTCTGGGGC ATCCTCGCCG GGGCCGCCGC CGCCATATGC
CTCCTCTCCG GCGGGCTGGA GGGCCTGCAG CAGGCCGCCA TCATCTCCGC CGCGCCCTTC
GTGGTGGTGA TGATCCTGAT GTGCTACTCC CTCTTCAGGG AGCTGCGCTC GGAGACCCTC
CCCGGGATAG CCCCGCCGGA GCACGACGGA GCCCAGAGCC TGAGCGCCCC CCGCCAGAGG
GCCCGAAAGG AGCCCTAG
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| Protein sequence | MLGKLRASSV DPGVFYVSVA VAAAFVVWGV FFTESLSAAA SAALGYVISN FGWVFVLSTF
GFLVFVLFLA FSRYGRIRLG REGEEPEFST PSWVAMMFSV GMGIGLMFYG VAEPISHLTA
PPHGLAEPGS EEAARLAMQY SYFHWALHPW AIYAVVGLSL AYFVFRKGRS NLISTAFYPL
LGDRVEGVPG KAIDVLAIFA TLFGTATSLG LGALQINGGL SYLWGVPTGT GVAIAIIAVL
TVAFVVSAVT GVHNGIQWLS NTNMVLAALL LLFVLVVGPT VFILNTFTES IGDYFSRLVP
MSFQTAAFGD ADWLAGWTIF YWAWWISWTP FVGTFIARIS RGRTIREFVL GVLVVPSLVT
FVWFAVLGGT ALDLQLDGGA DIAGAVSESP AAALFATLEQ FPLSVPMSLL AVFLVGLFFV
SGADAGAVVM GMLSSRGVLE PNRALVALWG ILAGAAAAIC LLSGGLEGLQ QAAIISAAPF
VVVMILMCYS LFRELRSETL PGIAPPEHDG AQSLSAPRQR ARKEP
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