Gene Rxyl_0733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0733 
Symbol 
ID4116540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp765151 
End bp765846 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content76% 
IMG OID638035517 
Productribose-5-phosphate isomerase A 
Protein accessionYP_643514 
Protein GI108803577 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0120] Ribose 5-phosphate isomerase 
TIGRFAM ID[TIGR00021] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.851526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCCGG ACGGGATGGA GCGGCTCAAG CGGGCCGCCG CCCGGGAGGC GGTGGACCGC 
TACGTGGAGA GCGGGATGGT GGTGGGGCTC GGGACCGGGA CGACCGCCTC CTGGGCGGTC
CGCAGGATCG GGGAGCGGCT GCTGGAGGGG AGCCTGAGCG GGGTGCGGGG GGTGCCCACC
TCGGAGTACA CGGCGGCGCT GGCCCGGGAG TGCGGGGTGC CGCTGGTCTC CCTCTCGGAG
CGCCGCCCGG AGCTGACCAT CGACGGGGCG GACGAGATCG CCCCGGACCT CAGCGTGATA
AAGGGCCGGG GCGGGGCGCT GCTGCGGGAG AAGATCGTGG CGGCCGCCTC GCGGCGGGGC
GTGGTGATCG TGGCGGACGG CTCCAAGCAG GTGTCGCTGC TGGGCAACGG GCCGCTGCCG
GTGGAGGTGG AGCCCTTCGG GTGGGAGGCC ACCGCGGAGG CGCTGGCCGC GCTGGGGTGC
GAGCCGGAGC TGCGCCGGGT CAAGACCCAG CCGTTCGTCA CGGACGGCGG GCACTACACG
CTGGACTGCC GCTTTCCGGG CATCCCGGAC CCCCCCGGGC TGGCCTGCAA GATAAAGCGG
GTGCCCGGGG CGCTGGAGTG CGGGCTCTTC GTGGGGCTGG CGCGGGCCGC GGTGATCGCG
CGCCCGGAGG GGGTGGAGGT GCTGGAGGCC GCCTAG
 
Protein sequence
MSPDGMERLK RAAAREAVDR YVESGMVVGL GTGTTASWAV RRIGERLLEG SLSGVRGVPT 
SEYTAALARE CGVPLVSLSE RRPELTIDGA DEIAPDLSVI KGRGGALLRE KIVAAASRRG
VVIVADGSKQ VSLLGNGPLP VEVEPFGWEA TAEALAALGC EPELRRVKTQ PFVTDGGHYT
LDCRFPGIPD PPGLACKIKR VPGALECGLF VGLARAAVIA RPEGVEVLEA A