Gene Rxyl_0701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0701 
Symbol 
ID4116586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp734744 
End bp735217 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content73% 
IMG OID638035486 
Producthypothetical protein 
Protein accessionYP_643483 
Protein GI108803546 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGACG ACCTGGACAT CATCTTCTGG GCGGTGGTGG CCGCCCTGGC CTTTATCGGG 
GAGATCTTCA CCGTCTCCTT CTTCCTGCTG TTCTTCTGCG CGGGGGCGCT GGTCGCGCTC 
GCCCTGGCCG CCGCGGGGCT CGGGGTGGGG CTGCAGGCGG CGGGCTTCGT CGCCGCGACC 
GTGCTGAGCA TGGCCGCGCT GAGGCCGGCG ATCGTCAACC GGATCTCGCT GCGGGGCGGC 
GAGCGGTACG AGCCGCGGGG GGGCATCGCC GGCAGGAGCG GGGTGGTGAC CGACCCCATC 
GAGCCCGGCT CGAGCGGGAC GGTGCGCATC GGCAGCGGGG AGTTCTGGAG CGCCCGCGCC 
GTCTACCCCG GGCAGAGGAT CGAGGCCGGG GCGCGGGTGC GCGTCCTGGA CACCGACGGG 
CTTACGGCCC TCGTCGAGCC GCTGGAAGGC GGGGAAGGAG GAGAGAAACG TTGA
 
Protein sequence
MGDDLDIIFW AVVAALAFIG EIFTVSFFLL FFCAGALVAL ALAAAGLGVG LQAAGFVAAT 
VLSMAALRPA IVNRISLRGG ERYEPRGGIA GRSGVVTDPI EPGSSGTVRI GSGEFWSARA 
VYPGQRIEAG ARVRVLDTDG LTALVEPLEG GEGGEKR