| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0696 |
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| Symbol | |
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| ID | 4117301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 730630 |
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| End bp | 731532 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638035481 |
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| Product | PgdS peptidase. cysteine peptidase. MEROPS family C40 |
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| Protein accession | YP_643478 |
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| Protein GI | 108803541 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTCAGGA CTGGGCTGGT TCTCGCGGCG CTTTCTCTCT CGGCGGCCCT GGCGGCGCTG
GGCCTCTCGG GGCGGGCGGC TCTGGCCGAC GCCTACTCGC AGGTCGTGGA CAACTCCACC
CGCGGCCGCT TCGAGGCGCC GGGGTGGGGG ACGAGCTCCT GGAACGACGG CCGCTACGGC
AAGGACTACC GCTACGCCCG GCCCGCCAGG GAGGCGAGGC CCGCCCGCTA CAGGGTGAAG
ATACCCGCCA CCGGCTACTA CACCGTGTAC GCCCGCTGGC CCGCGGACCG GGGCTACAAC
GCGGGCACCC GCATAGGGGT GAGCGCCGCG GGCGGGCTGC GGTGGGTGAG GGTCGACCAG
CAGAGGAACG GCGACCGCTG GAACCGGCTC GGGGTCTTCA GGATGAAGGC CGGGGACCGC
TTCTACATAA GGGTCTCGCG CAGGGCCGGG GGCGGGAAGT ACGTCATAGC GGACGCCGTC
AAGGTGGTGA GGGGCAGGGT CGGCGGCTCC GGCGGCTCGG GCATCACCGG GTACGACATC
CTCGAGGAGG CCAGGAGCTG GCTCGGGGTG CCGTACAAGT ACGGGGGGGA GTCGCGCGAG
GGGGTCGACT GCTCCGGGCT CACCATGAAG GTCTACGAGA GGTTCGGCAT AGAGCTGCCG
CGGACGGCGC ACGACCAGTA CTACTCCGGT CCGGGCAGGA AGGTTTCCAG GAGCGAGCTC
CGGCGCGGCT ACCTCGTCTT CGGGCACGCC GACGGGGGCA GCGGCATAGA GCACGTGGGG
ATCCTCACCG GGGACGGGCG CATGATCCAC GCCCCGGCCC CCGGCACCGT GGTGCGCTAC
GACGACGTCC CGGCGCGCTG GTACAACATC GTCGGGGTCA AGCGGATAGT CCCTCCCCGG
TAG
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| Protein sequence | MFRTGLVLAA LSLSAALAAL GLSGRAALAD AYSQVVDNST RGRFEAPGWG TSSWNDGRYG
KDYRYARPAR EARPARYRVK IPATGYYTVY ARWPADRGYN AGTRIGVSAA GGLRWVRVDQ
QRNGDRWNRL GVFRMKAGDR FYIRVSRRAG GGKYVIADAV KVVRGRVGGS GGSGITGYDI
LEEARSWLGV PYKYGGESRE GVDCSGLTMK VYERFGIELP RTAHDQYYSG PGRKVSRSEL
RRGYLVFGHA DGGSGIEHVG ILTGDGRMIH APAPGTVVRY DDVPARWYNI VGVKRIVPPR
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