| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0686 |
|---|
| Symbol | |
|---|
| ID | 4117291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 720921 |
|---|
| End bp | 721730 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 638035471 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_643468 |
|---|
| Protein GI | 108803531 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0121] Predicted glutamine amidotransferase |
|---|
| TIGRFAM ID | [TIGR03442] conserved hypothetical protein TIGR03442 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCT ACATCGGGGA GCGCCCCGTC CCCCTCTCCG CCCTGGCGCT GGAGCCCGAG
CATTCGCTGC TGGTGCAGAG CTACGCCCCG CGCGAGATGC AGAGCGGCGT GGTGAACGCC
GACGGCTTCG GGGCCGGGTG GTACGCCCCG GAGGTGGACC CGGAGCCCGC CGTCTACCGC
TCGGTGCGCC CGATCTGGGC GGACAGGAGC TTCGCGAGCA TCGCCCCGCG GGTCCTGAGC
CCGGTCGTCT TCGCCGCCGT CCGCAGCGCC ACCCCGGGCC TCCCGGCCGA GGAGAGCGGG
GTGCCCCCCT TCTCCGCGGG CCGCTACATG TTCATGCACA ACGGCGCGGT GGAGGGCTTC
CGGCGCTCGG CCATGCGCCG GCTGCGCGGC TCGCTGAGCG ACGAGGCCTA CGCCGGGCTC
CTCGGGGTCT CGGACTCGGA GACGATCTTC GCCTGCCTGC TGGACCGCCT GCGGGGCTCC
CCAAAGGACC CGGAGGGGGC GCTCGCCGAA ACGGTGCGCT TTCTCTTCGA GACCTGCGCG
GAGCTAGGCG TGGGGGCCGC GCTGAACCTC GGCCTCACCG ACGGGGAGAG GGCGGCCTTC
GCCCGCTGCT CGACGGAGGG GCCGGGCAAC TCGCTGTACT TCCTGGAGGG CGGGCGGGCC
TTCCGGGGGG GCGTGGTGGT GGCCTCGGAG CCGCTCGACG CCGACCCCGG GTGGAGGGAG
GTCCCGGACC GGCACCTGCT CTCGGCGGGC CGCCCGGGGG GCGTCGCCCT GAGGCCGCTC
GAGCTCCCCG GCCCCGGGGC GCCCTCTTGA
|
|---|
| Protein sequence | MAAYIGERPV PLSALALEPE HSLLVQSYAP REMQSGVVNA DGFGAGWYAP EVDPEPAVYR
SVRPIWADRS FASIAPRVLS PVVFAAVRSA TPGLPAEESG VPPFSAGRYM FMHNGAVEGF
RRSAMRRLRG SLSDEAYAGL LGVSDSETIF ACLLDRLRGS PKDPEGALAE TVRFLFETCA
ELGVGAALNL GLTDGERAAF ARCSTEGPGN SLYFLEGGRA FRGGVVVASE PLDADPGWRE
VPDRHLLSAG RPGGVALRPL ELPGPGAPS
|
|---|
| |