Gene Rxyl_0653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0653 
Symbol 
ID4116519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp686182 
End bp686865 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content71% 
IMG OID638035438 
ProductDtxR family iron dependent repressor 
Protein accessionYP_643435 
Protein GI108803498 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00367016 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAG CCGTATCAGA GGGCGGGGGC AGGCTCTCGG TCTCCACGGA GGATTACCTG 
AAGGCGATCT GGGCCGTGGG CCGGGAGGGT TCGGCGTCCA CCAAGGAGAT CTCGGAGCAC 
CTCTCGGTGG CTCCGGCCTC GGTCACCAAC ATGCTGGGCC GGCTGCAGGA GATGGGCTTT 
GTCCGCTACG AGCGCTACCG GGGGGCCTCC CTGACGGAGA AGGGCTACCG GGAGGCGCTG 
CGCCTGGTGC GCAAGCACCG GCTGATAGAG ACGTTCCTCC TGGAGCACCT GGGCTACTCC 
TGGCAGGAGG TGCACGAGGA GGCCGAGAGG CTGGAGCATG CGGTCTCGGA CCTCTTCACC 
GAGCGGCTGG CGGAGTACCT GGGGCACCCC GGGCGCGACC CGCACGGCGA CCCCATCCCC 
GCCCCGGACG GCACGATGGA GCGCCAGGAG GCGCGGCCGC TGGCCGAGAC GGCGGCCGGC 
GAGCGGGTGA GGATCTCGCG GGTCGACCAG AGCAGCCCCG AGGTGCTGGA GTACTTCGGG 
GAGCGGGGCC TCGTCCCCGG GCGGCGGCTC CGGGTGACCG AGACCCGGAA GCTGGACGGG 
GTCATCGCGG TGGAGGACGA GGAGGGAAAC GCCCACACCC TGGGGGCCCC GCTGGCCCGG 
TCGGTGTTCG TGGAGAGGGA CTAG
 
Protein sequence
MAKAVSEGGG RLSVSTEDYL KAIWAVGREG SASTKEISEH LSVAPASVTN MLGRLQEMGF 
VRYERYRGAS LTEKGYREAL RLVRKHRLIE TFLLEHLGYS WQEVHEEAER LEHAVSDLFT 
ERLAEYLGHP GRDPHGDPIP APDGTMERQE ARPLAETAAG ERVRISRVDQ SSPEVLEYFG 
ERGLVPGRRL RVTETRKLDG VIAVEDEEGN AHTLGAPLAR SVFVERD