Gene Rxyl_0650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0650 
Symbol 
ID4116516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp683905 
End bp685005 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content78% 
IMG OID638035435 
ProductL-threonine O-3-phosphate decarboxylase 
Protein accessionYP_643432 
Protein GI108803495 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID[TIGR01140] L-threonine-O-3-phosphate decarboxylase
[TIGR01141] histidinol-phosphate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000240372 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCCCCA ACCCCCCCTT CGACCGGGCG CGCCCCGAGG CCCACGGCGC GCTGGACCTC 
GCCGAGCTCG AGCGGCGCGG CGTGGATCCG GAAGAGGTGG TGGACTTCAG CGCGAGCGTA
AACCCCTGCG GCCCGGCGCC GGCGGTGCTC GAGGCCGCCC GCCGGGCGGA CATCGCCTGC
TACCCGGACC GGACCTGCCT CGGGCTGCGG CGGACCCTGG CGAGGCGTCT GGGGCTGGAT
GTCTCCTGGA TCTGCCCGGG CAACGGCTCC GCCGAGCTCA TAGACCTCCT CGCCCGCCTC
TACCTCTCCC CCGGGGACGC CGCCCTCGTG GTGGGGCCCA CCTTCGGCGA GTACGGGCGG
GCCAGCCGGC TCTGCGGGGC CCGGGTGCTG CGGTGGGACC GGGGCGTCCG CGGCGGGGAG
GTCTCCCTCG ACCTGGACGG CCTCGCCGGG GCCGTGCTGC GCGAGAGGCC CCGGGTGGTG
TGGCTGTGCA GCCCCAACAA CCCCACGGGC GACCTCCTCC CCGGTACCGG GGTGCGGCGC
CTGCTCGGGG CGGTGGAGGC GGCGGGCGGG CTTCTGGTGG TGGACGAGGC CTACCGCGAT
CTGGTGCTCC GCGGGGAGCC GGACGACCTC ACCGGCCTGC TGGAGGGGGG ACGCCTCGTG
CTGCTGCGCT CGATGACCAA GGCCCACGCG CTGGCGGGCC TGAGGCTCGG CTACGCCCTG
GCCCCCCCGG AGGCGGTGCG GGCGCTGGAG GTCGCCCGGC CGCCGTGGAG CGTGAGCGCC
CCGGCGCAGG CGGCCGGGGT CGCCGCCCTC TCCCCGGCGG CGGAGGAGCA CCTCCTGCGC
TCCCGGCGTC TGCTGGCCCG GAGCGCCGCG CTGCTCGCGG AGGGGCTCTC CCGGCTGGGC
CTCCGCTTCG CCCCCGGCGC GGCCAACTTC TTCCTCGTGG AGGTCGGCAG CGGCAGGGGG
GTGCGCGAGG CCCTGCTGCG GCGGGGCCTG CAGGTGCGCG ACTGCGCCTC CTTCGGGCTG
CCCGCGCACA TCCGGATCGC CGTCCGGCGG CCGGAGGAGA ACGCGAGGCT GCTGGCGGCG
CTCGGGGAGG TGCTGCCGTA G
 
Protein sequence
MRPNPPFDRA RPEAHGALDL AELERRGVDP EEVVDFSASV NPCGPAPAVL EAARRADIAC 
YPDRTCLGLR RTLARRLGLD VSWICPGNGS AELIDLLARL YLSPGDAALV VGPTFGEYGR
ASRLCGARVL RWDRGVRGGE VSLDLDGLAG AVLRERPRVV WLCSPNNPTG DLLPGTGVRR
LLGAVEAAGG LLVVDEAYRD LVLRGEPDDL TGLLEGGRLV LLRSMTKAHA LAGLRLGYAL
APPEAVRALE VARPPWSVSA PAQAAGVAAL SPAAEEHLLR SRRLLARSAA LLAEGLSRLG
LRFAPGAANF FLVEVGSGRG VREALLRRGL QVRDCASFGL PAHIRIAVRR PEENARLLAA
LGEVLP